RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.79□□□□□ -1
KDM1B-203ENST00000546309 ATP2A1O14983 1001 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 STRNO43815 780 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 CUTAO60888 179 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 STAT3P40763 770 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 FOSBP53539 338 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 TLE2Q04725 743 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 NR5A1Q13285 461 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 PLS1Q14651 629 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 ZSCAN23Q3MJ62 389 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 TTBK2Q6IQ55 1244 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 TYW1BQ6NUM6 668 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 CAVIN1Q6NZI2 390 aaKnown RBP8.79□□□□□ -1
KDM1B-203ENST00000546309 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
KDM1B-203ENST00000546309 DPP9Q86TI2 863 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 ENGASEQ8NFI3 743 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 CHURC1Q8WUH1 139 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 PIGSQ96S52 555 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 TINF2Q9BSI4 451 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 COL25A1Q9BXS0 654 aaPredicted RBP8.79□□□□□ -1
KDM1B-203ENST00000546309 UBA5Q9GZZ9 404 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 MROH8Q9H579 483 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 SLC38A10Q9HBR0 1119 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 CLIC4Q9Y696 253 aa8.79□□□□□ -1
KDM1B-203ENST00000546309 hCG_1642624A0A1W2PR95 340 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 SMCO2A6NFE2 343 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 LAD1O00515 517 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FDX1P10109 184 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
KDM1B-203ENST00000546309 CDK7P50613 346 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FAM160A1Q05DH4 1040 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FAAP100Q0VG06 881 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 C1orf53Q5VUE5 145 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 ARL6IP4Q66PJ3 421 aaKnown RBP8.78□□□□□ -1
KDM1B-203ENST00000546309 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 KRT25Q7Z3Z0 450 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FAM160B2Q86V87 743 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 MB21D1Q8N884 522 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FAM133AQ8N9E0 248 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 ARRDC4Q8NCT1 418 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 BADQ92934 168 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 AGBL1Q96MI9 1066 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 TIGD1Q96MW7 591 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 MAF1Q9H063 256 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 GPCPD1Q9NPB8 672 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 RIC8AQ9NPQ8 531 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FEM1BQ9UK73 627 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 PNMA2Q9UL42 364 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 PCDHA6Q9UN73 950 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 PCDHA8Q9Y5H6 950 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 SRPRBQ9Y5M8 271 aaKnown RBP8.78□□□□□ -1
KDM1B-203ENST00000546309 SCN5AQ14524 2016 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 FRMPD2Q68DX3 1309 aaPredicted RBP8.78□□□□□ -1
KDM1B-203ENST00000546309 SYNRGQ9UMZ2 1314 aa8.78□□□□□ -1
KDM1B-203ENST00000546309 ME1P48163 572 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 MRPL12P52815 198 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 NAPAP54920 295 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 NKX3-2P78367 333 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 ATP2C1P98194 919 aaPredicted RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 CCDC96Q2M329 555 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 EARS2Q5JPH6 523 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 SYDE2Q5VT97 1194 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 RESP18Q5W5W9 173 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 KCTD1Q719H9 257 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 HEATR3Q7Z4Q2 680 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 FMR1NBQ8N0W7 255 aaPredicted RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 SAMD3Q8N6K7 520 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 MAFAQ8NHW3 353 aaPredicted RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 GPKOWQ92917 476 aaPredicted RBP eCLIP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 MMP19Q99542 508 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 SLF1Q9BQI6 1058 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 AMNQ9BXJ7 453 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 FTOQ9C0B1 505 aaKnown RBP eCLIP8.77□□□□□ -1.019e-6■□□□□ 10.5
KDM1B-203ENST00000546309 PDGFCQ9NRA1 345 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 HPSEQ9Y251 543 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 DIS3Q9Y2L1 958 aaKnown RBP8.77□□□□□ -1.01
KDM1B-203ENST00000546309 PCDHB6Q9Y5E3 794 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 PTPRSQ13332 1948 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 UMODL1Q5DID0 1318 aa8.77□□□□□ -1.01
KDM1B-203ENST00000546309 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 A0A1W2PQ45 241 aaPredicted RBP8.76□□□□□ -1.01
KDM1B-203ENST00000546309 A0A1W2PQY0 241 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 TMEM232C9JQI7 657 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 FCER1AP12319 257 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 LIG1P18858 919 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 PRPHP41219 470 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 STAT2P52630 851 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 CEBPZQ03701 1054 aaKnown RBP8.76□□□□□ -1.01
KDM1B-203ENST00000546309 NONOQ15233 471 aaKnown RBP eCLIP8.76□□□□□ -1.01
KDM1B-203ENST00000546309 QRICH1Q2TAL8 776 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 TTC38Q5R3I4 469 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 L1TD1Q5T7N2 865 aaKnown RBP8.76□□□□□ -1.01
KDM1B-203ENST00000546309 SNRNP48Q6IEG0 339 aaKnown RBP8.76□□□□□ -1.01
KDM1B-203ENST00000546309 TAPT1Q6NXT6 567 aa8.76□□□□□ -1.01
KDM1B-203ENST00000546309 CCDC73Q6ZRK6 1079 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms