RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MGAMO43451 1857 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 BTBD19C9JJ37 291 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 IGF2BP3O00425 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 IFIT3O14879 490 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 WDR46O15213 610 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 CPA1P15085 419 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 RPS6KB1P23443 525 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 WEE1P30291 646 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 MAP2K2P36507 400 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 RBM25P49756 843 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 KIF23Q02241 960 aaPredicted RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 ELOAQ14241 798 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 WTAPQ15007 396 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 SEC23AQ15436 765 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 KIAA1755Q5JYT7 1200 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 TREML2Q5T2D2 321 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 DGKHQ86XP1 1220 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 FAM43AQ8N2R8 423 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 TMEM87BQ96K49 555 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 TMEM47Q9BQJ4 181 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 LRRC2Q9BYS8 371 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 TM6SF1Q9BZW5 370 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 KAT14Q9H8E8 782 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 LY9Q9HBG7 655 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.22
PRKDC-211ENST00000546304 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
PRKDC-211ENST00000546304 ZSWIM8A7E2V4 1837 aa7.4□□□□□ -1.23
PRKDC-211ENST00000546304 PLXNB2O15031 1838 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 F5H6K3 240 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 PDHBP11177 359 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 CD33P20138 364 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 RFX1P22670 979 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 INHBEP58166 350 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 IRX3P78415 501 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 FGD1P98174 961 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 EXOSC10Q01780 885 aaKnown RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 KLRC3Q07444 240 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 PABPC4Q13310 644 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 FAM83BQ5T0W9 1011 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 GPAT2Q6NUI2 795 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 RUFY3Q7L099 469 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 ANKRD23Q86SG2 305 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 IGDCC4Q8TDY8 1250 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 ANKS1AQ92625 1134 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 MKL1Q969V6 931 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 TTC14Q96N46 770 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 PARK7Q99497 189 aaKnown RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 NUP88Q99567 741 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 PTPN18Q99952 460 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 TANGO6Q9C0B7 1094 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 RPAP3Q9H6T3 665 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 MARK1Q9P0L2 795 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
PRKDC-211ENST00000546304 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 SLC45A1Q9Y2W3 748 aa7.39□□□□□ -1.23
PRKDC-211ENST00000546304 NID2Q14112 1375 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 ADGRA2Q96PE1 1338 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 CCDC69A6NI79 296 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 GOLGA8BA8MQT2 603 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SHISA8B8ZZ34 492 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 PDHXO00330 501 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 FLOT1O75955 427 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 DDAH1O94760 285 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SNHG28P0DPA3 235 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 LIFRP42702 1097 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SLC1A4P43007 532 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 TM4SF4P48230 202 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
PRKDC-211ENST00000546304 HIF1AQ16665 826 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
PRKDC-211ENST00000546304 OTUD7BQ6GQQ9 843 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 KANK3Q6NY19 840 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 APOA5Q6Q788 366 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 NFXL1Q6ZNB6 911 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 CATIPQ7Z7H3 387 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SGMS1Q86VZ5 419 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 MICU3Q86XE3 530 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 ZNF654Q8IZM8 581 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 GALNT6Q8NCL4 622 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SMCR8Q8TEV9 937 aaPredicted RBP7.38□□□□□ -1.23
PRKDC-211ENST00000546304 EDARADDQ8WWZ3 215 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 AGXT2Q9BYV1 514 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 ASCC2Q9H1I8 757 aaPredicted RBP7.38□□□□□ -1.23
PRKDC-211ENST00000546304 NOVA2Q9UNW9 492 aaKnown RBP7.38□□□□□ -1.23
PRKDC-211ENST00000546304 CASP8AP2Q9UKL3 1982 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 ZNF236Q9UL36 1845 aa7.38□□□□□ -1.23
PRKDC-211ENST00000546304 SMCHD1A6NHR9 2005 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 DOCK3Q8IZD9 2030 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 FRMPD2Q68DX3 1309 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms