RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GOLGA6L10A6NI86 522 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 MINDY4BA8MYZ0 360 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 MAP3K13O43283 966 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 CYP7A1P22680 504 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBR1-202ENST00000546274 DDB1Q16531 1140 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 RASGRP2Q7LDG7 609 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 TBC1D1Q86TI0 1168 aaPredicted RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 DYDC1Q8WWB3 177 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 ESR2Q92731 530 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 MMTAG2Q9BU76 263 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 C2CD2Q9Y426 696 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 COBLO75128 1261 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 CAMTA2O94983 1202 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 CASP14P31944 242 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 ATP2C1P98194 919 aaPredicted RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 MPP3Q13368 585 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 DRP2Q13474 957 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 BLMHQ13867 455 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 PPP2R5BQ15173 497 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 CCDC88AQ3V6T2 1871 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 KLHL10Q6JEL2 608 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 KCNV2Q8TDN2 545 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 AGAP11Q8TF27 550 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 ARHGEF1Q92888 912 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 HVCN1Q96D96 273 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 NAA15Q9BXJ9 866 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 TNS1Q9HBL0 1735 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 V9GY48 417 aaPredicted RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 SEMA3EO15041 775 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 FAM107AO95990 144 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 ABL2P42684 1182 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 SLC7A5Q01650 507 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 NUGGCQ68CJ6 796 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 GALNT15Q8N3T1 639 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 TSEN2Q8NCE0 465 aaKnown RBP8.67□□□□□ -1.02
UBR1-202ENST00000546274 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 FAM184BQ9ULE4 1060 aa8.67□□□□□ -1.02
UBR1-202ENST00000546274 LRRD1A4D1F6 860 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 LRRC10BA6NIK2 292 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 EVI5O60447 810 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 PDHA1P08559 390 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 NR1D1P20393 614 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 CNGA1P29973 690 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 ERVK-24P63145 666 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 DYNLL1P63167 89 aaKnown RBP8.66□□□□□ -1.02
UBR1-202ENST00000546274 C2orf54Q08AI8 447 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 ZNF174Q15697 407 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 EZH2Q15910 746 aaKnown RBP8.66□□□□□ -1.02
UBR1-202ENST00000546274 MTHFD1LQ6UB35 978 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 C6orf89Q6UWU4 347 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 TSHZ1Q6ZSZ6 1077 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 STAMQ92783 540 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 A6NNZ2 444 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 VEGFAP15692 232 aaPredicted RBP8.66□□□□□ -1.02
UBR1-202ENST00000546274 GYG1P46976 350 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 PTGDRQ13258 359 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 XRCC4Q13426 336 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 QPCTQ16769 361 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 TUBB8Q3ZCM7 444 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 CCDC152Q4G0S7 254 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 GALNT17Q6IS24 598 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 TMTC3Q6ZXV5 915 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 SRBD1Q8N5C6 995 aaKnown RBP8.66□□□□□ -1.02
UBR1-202ENST00000546274 HDAC7Q8WUI4 952 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 PANK4Q9NVE7 773 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 LIMA1Q9UHB6 759 aaKnown RBP8.66□□□□□ -1.02
UBR1-202ENST00000546274 CTNND2Q9UQB3 1225 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 SBF2Q86WG5 1849 aa8.66□□□□□ -1.02
UBR1-202ENST00000546274 N4BP3O15049 544 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 ZNF185O15231 689 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 NMT2O60551 498 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 KIF5BP33176 963 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 KRT31Q15323 416 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 TTC38Q5R3I4 469 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 IFIT1BQ5T764 474 aaKnown RBP8.65□□□□□ -1.02
UBR1-202ENST00000546274 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 BRIP1Q9BX63 1249 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 IQCGQ9H095 443 aaKnown RBP8.65□□□□□ -1.02
UBR1-202ENST00000546274 BLZF1Q9H2G9 400 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBR1-202ENST00000546274 RASSF10A6NK89 507 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 CREB3O43889 395 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 CDC25AP30304 524 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 IGHMBP2P38935 993 aaKnown RBP8.65□□□□□ -1.02
UBR1-202ENST00000546274 MDH1P40925 334 aaKnown RBP8.65□□□□□ -1.02
UBR1-202ENST00000546274 CRKLP46109 303 aaKnown RBP8.65□□□□□ -1.02
UBR1-202ENST00000546274 CD151P48509 253 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 TAF11Q15544 211 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms