RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 PPP1R14BQ96C90 147 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 STAMBPL1Q96FJ0 436 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.37□□□□□ -1.23
NECAP1-208ENST00000545807 EHD4Q9H223 541 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 PREBQ9HCU5 417 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 HPS5Q9UPZ3 1129 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 TMED5Q9Y3A6 229 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 SAMM50Q9Y512 469 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 SPO11Q9Y5K1 396 aa7.37□□□□□ -1.23
NECAP1-208ENST00000545807 VWA3AA6NCI4 1184 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 RASSF10A6NK89 507 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 KIF4AO95239 1232 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 DPEP1P16444 411 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 GNAT2P19087 354 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 HOXD10P28358 340 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 PLCD1P51178 756 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CBX3Q13185 183 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 RIPK1Q13546 671 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SKIDA1Q1XH10 827 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 APOA5Q6Q788 366 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CLEC10AQ8IUN9 316 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 MAIP1Q8WWC4 291 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 IWS1Q96ST2 819 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CLSTN2Q9H4D0 955 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ZNF277Q9NRM2 450 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ANO10Q9NW15 660 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 RABL2AQ9UBK7 228 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TNKSO95271 1327 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SH2B2O14492 632 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ATP9BO43861 1147 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CUTAO60888 179 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ZNF202O95125 648 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 VIMP08670 466 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 MCM3P25205 808 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ABL2P42684 1182 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 OXCT1P55809 520 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CHMP4BP1P59074 171 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 C1QBPQ07021 282 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ENOX2Q16206 610 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 WDR93Q6P2C0 686 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 NCCRP1Q6ZVX7 275 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 RASGRP2Q7LDG7 609 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TEKT4Q8WW24 435 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CPVLQ9H3G5 476 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 DDX19AQ9NUU7 478 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CROTQ9UKG9 612 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 HPCAL4Q9UM19 191 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 GOLGA6L4A6NEF3 574 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TMEM232C9JQI7 657 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SEMA3EO15041 775 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 PPIP5K2O43314 1243 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 GFPT2O94808 682 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ATP6V1G2O95670 118 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 BAG3O95817 575 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CCDC166P0CW27 439 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 BCRP11274 1271 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 FDPSP14324 419 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CA8P35219 290 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 PSMD7P51665 324 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 VSNL1P62760 191 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 GNGT1P63211 74 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 CAMK4Q16566 473 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SGSM1Q2NKQ1 1148 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 WDR78Q5VTH9 848 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ZSCAN29Q8IWY8 852 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TEX9Q8N6V9 391 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 IGDCC4Q8TDY8 1250 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 ESR2Q92731 530 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 PPP2R3CQ969Q6 453 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 L3MBTL3Q96JM7 780 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 C8orf76Q96K31 380 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 DNAJC25Q9H1X3 360 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TNMDQ9H2S6 317 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 LY9Q9HBG7 655 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 NOD2Q9HC29 1040 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 TUBA8Q9NY65 449 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 PUF60Q9UHX1 559 aaKnown RBP7.36□□□□□ -1.23
NECAP1-208ENST00000545807 C2CD2Q9Y426 696 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 MYH2Q9UKX2 1941 aa7.36□□□□□ -1.23
NECAP1-208ENST00000545807 SRRM3A6NNA2 597 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-208ENST00000545807 RGL2O15211 777 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 PDCP20941 246 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 TFAP4Q01664 338 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 WHAMMP3Q1A5X7 153 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 SEPT14Q6ZU15 432 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 CATIPQ7Z7H3 387 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 CEP57L1Q8IYX8 460 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
NECAP1-208ENST00000545807 OPTNQ96CV9 577 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms