RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 CCDC170Q8IYT3 715 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 EIF3CQ99613 913 aaKnown RBP17.34■□□□□ 0.37
SCAP-215ENST00000545718 ARHGAP20Q9P2F6 1191 aa17.34■□□□□ 0.37
SCAP-215ENST00000545718 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.37
SCAP-215ENST00000545718 ZNF263O14978 683 aa17.33■□□□□ 0.37
SCAP-215ENST00000545718 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.37
SCAP-215ENST00000545718 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.37
SCAP-215ENST00000545718 GPS2Q13227 327 aa17.33■□□□□ 0.37
SCAP-215ENST00000545718 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.37
SCAP-215ENST00000545718 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.37
SCAP-215ENST00000545718 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.37
SCAP-215ENST00000545718 FGFBP2Q9BYJ0 223 aa17.33■□□□□ 0.37
SCAP-215ENST00000545718 VPS18Q9P253 973 aa17.33■□□□□ 0.37
SCAP-215ENST00000545718 N4BP1O75113 896 aaKnown RBP17.33■□□□□ 0.36
SCAP-215ENST00000545718 GDF11O95390 407 aa17.33■□□□□ 0.36
SCAP-215ENST00000545718 CRKP46108 304 aa17.33■□□□□ 0.36
SCAP-215ENST00000545718 KIF11P52732 1056 aa17.33■□□□□ 0.36
SCAP-215ENST00000545718 POLD4Q9HCU8 107 aa17.33■□□□□ 0.36
SCAP-215ENST00000545718 USO1O60763 962 aaKnown RBP17.32■□□□□ 0.36
SCAP-215ENST00000545718 MOCS3O95396 460 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 MRPS25P82663 173 aaKnown RBP17.32■□□□□ 0.36
SCAP-215ENST00000545718 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 MEIS1O00470 390 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 CXCR5P32302 372 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 VAV2P52735 878 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 SLFN13Q68D06 897 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 PPP4R3AQ6IN85 833 aa17.32■□□□□ 0.36
SCAP-215ENST00000545718 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
SCAP-215ENST00000545718 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 APBA1Q02410 837 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 LRRC63Q05C16 580 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 CASP8Q14790 479 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 SEPT2Q15019 361 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 PRR16Q569H4 304 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 LRRC27Q9C0I9 530 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 L1RE1Q9UN81 338 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 PCDHA13Q9Y5I0 950 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 CAPN6Q9Y6Q1 641 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 LMAN1P49257 510 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 C2orf54Q08AI8 447 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 TMEM119Q4V9L6 283 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 PLAGL2Q9UPG8 496 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 SPATA31A6Q5VVP1 1343 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 PLIN4Q96Q06 1357 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 POTEFA5A3E0 1075 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
SCAP-215ENST00000545718 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 POTEIP0CG38 1075 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 CYP2C19P33261 490 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 LRRC55Q6ZSA7 311 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
SCAP-215ENST00000545718 EPS15P42566 896 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 MAGEA1P43355 309 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
SCAP-215ENST00000545718 HSP90B2PQ58FF3 399 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 ANO3Q9BYT9 981 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 CCDC66A2RUB6 948 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 MAP2K7O14733 419 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 BUB1O43683 1085 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 TACC1O75410 805 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 FKBP3Q00688 224 aaKnown RBP17.3■□□□□ 0.36
SCAP-215ENST00000545718 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 PPP1R18Q6NYC8 613 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 CCDC65Q8IXS2 484 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 HNRNPLLQ8WVV9 542 aaKnown RBP17.3■□□□□ 0.36
SCAP-215ENST00000545718 DNAJC19Q96DA6 116 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.3■□□□□ 0.36
SCAP-215ENST00000545718 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
SCAP-215ENST00000545718 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 PDE2AO00408 941 aaPredicted RBP17.29■□□□□ 0.36
SCAP-215ENST00000545718 CLK2P49760 499 aaKnown RBP17.29■□□□□ 0.36
SCAP-215ENST00000545718 TUBB4BP68371 445 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 SMARCAL1Q9NZC9 954 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 MMP10P09238 476 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 NPR1P16066 1061 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 RASSF7Q02833 373 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 ICA1Q05084 483 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 CKAP4Q07065 602 aaKnown RBP17.29■□□□□ 0.36
SCAP-215ENST00000545718 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■■■□□ 18.8
SCAP-215ENST00000545718 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 PAPD7Q5XG87 772 aaKnown RBP17.29■□□□□ 0.36
SCAP-215ENST00000545718 TMC4Q7Z404 712 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 NT5C3AQ9H0P0 336 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 ADAM21Q9UKJ8 722 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 SUGT1Q9Y2Z0 365 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 LY75O60449 1722 aa17.29■□□□□ 0.36
SCAP-215ENST00000545718 USP14P54578 494 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 POLR2FP61218 127 aaKnown RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 FAM193AP78312 1265 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms