RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 MXD3Q9BW11 206 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 SUN1O94901 812 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 IFNB1P01574 187 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 SERPINB2P05120 415 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 TMOD1P28289 359 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 SH2D4BQ5SQS7 431 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 MIS18BP1Q6P0N0 1132 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 CUL1Q13616 776 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 ACRBPQ8NEB7 543 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 MRPL47Q9HD33 250 aaKnown RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 EIF4A3P38919 411 aaKnown RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 MAGOHBQ96A72 148 aaKnown RBP13.62□□□□□ -0.23
COL4A6-209ENST00000545689 RILPQ96NA2 401 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 PI4KBQ9UBF8 816 aa13.62□□□□□ -0.23
COL4A6-209ENST00000545689 CCDC197Q8NCU1 140 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 COA1Q9GZY4 146 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ST7Q9NRC1 585 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ENC1O14682 589 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ECEL1O95672 775 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 CCND2P30279 289 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 EFCAB13Q8IY85 973 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 CDKL2Q92772 493 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 PARVGQ9HBI0 331 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 SPATA31A3Q5VYP0 1347 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
COL4A6-209ENST00000545689 STAT2P52630 851 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ZNF148Q9UQR1 794 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 HNRNPDLO14979 420 aaKnown RBP13.61□□□□□ -0.23
COL4A6-209ENST00000545689 HIP1RO75146 1068 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ZNF653Q96CK0 615 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 EPB41L5Q9HCM4 733 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 MAPK4P31152 587 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 BAG6P46379 1132 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 CDK8P49336 464 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-209ENST00000545689 ANKRD35Q8N283 1001 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
COL4A6-209ENST00000545689 SEC31AO94979 1220 aaKnown RBP13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 SURF1Q15526 300 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 ANKRD36BP1Q96IX9 119 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 MESDQ14696 234 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
COL4A6-209ENST00000545689 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
COL4A6-209ENST00000545689 PCDHB4Q9Y5E5 795 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GOLGA8QA0A0J9YX86 632 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 PVALEFA0A1B0GWK0 134 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GOLGA8OA6NCC3 632 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GOLGA8NF8WBI6 632 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 CLCN6P51797 869 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 KCTD1Q719H9 257 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 ANKRD13CQ8N6S4 541 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 EPSTI1Q96J88 318 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 NUF2Q9BZD4 464 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 LGALS16A8MUM7 142 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 CCDC188H7C350 402 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 MOCS3O95396 460 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 ABCA9Q8IUA7 1624 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 CEP152O94986 1710 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 NEDD4P46934 1319 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 MED7O43513 233 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
COL4A6-209ENST00000545689 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 FAM133AQ8N9E0 248 aa13.6□□□□□ -0.23
COL4A6-209ENST00000545689 IRX5P78411 483 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 RHOT2Q8IXI1 618 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 CEP72Q9P209 647 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 CPSF2Q9P2I0 782 aaKnown RBP13.59□□□□□ -0.23
COL4A6-209ENST00000545689 SEPT6Q14141 434 aa13.59□□□□□ -0.23
COL4A6-209ENST00000545689 LRRC41Q15345 812 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms