RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 CCDC70Q6NSX1 233 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 KCTD1Q719H9 257 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
SEC23A-203ENST00000545328 SBF2Q86WG5 1849 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 A0A1W2PQJ5 194 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 RHBDL3P58872 404 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 LRRC55Q6ZSA7 311 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 MXD3Q9BW11 206 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 TARSL2A2RTX5 802 aaKnown RBP18.73■□□□□ 0.59
SEC23A-203ENST00000545328 POLR2FP61218 127 aaKnown RBP18.73■□□□□ 0.59
SEC23A-203ENST00000545328 BAP1Q92560 729 aa18.73■□□□□ 0.59
SEC23A-203ENST00000545328 RBM12Q9NTZ6 932 aaKnown RBP18.73■□□□□ 0.59
SEC23A-203ENST00000545328 GTF2IP78347 998 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 KCNMA1Q12791 1236 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 COASYQ13057 564 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 GPR75-ASB3A0A0A6YYF3 556 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 GOLGA6CA6NDK9 693 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 PPP1R11O60927 126 aaPredicted RBP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 GOLGA6DP0CG33 693 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 AARSP49588 968 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 RAPGEF1Q13905 1077 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 FIGNQ5HY92 759 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 IQCEQ6IPM2 695 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 FNBP4Q8N3X1 1017 aaPredicted RBP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 GUF1Q8N442 669 aaKnown RBP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 TSG101Q99816 390 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 RASSF4Q9H2L5 321 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 VIPAS39Q9H9C1 493 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 GOLGA6AQ9NYA3 693 aa18.72■□□□□ 0.59
SEC23A-203ENST00000545328 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
SEC23A-203ENST00000545328 IVLP07476 585 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 MYOCDQ8IZQ8 938 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 TSEN2Q8NCE0 465 aaKnown RBP18.71■□□□□ 0.59
SEC23A-203ENST00000545328 NGLY1Q96IV0 654 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 STK17AQ9UEE5 414 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L15C9J2P7 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L11C9JVI0 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L18D6R9N7 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L22D6RA61 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L19D6RCP7 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L20D6RJB6 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 STAT3P40763 770 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L24Q0WX57 530 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 PDXDC1Q6P996 788 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 ZNF662Q6ZS27 426 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 CCDC84Q86UT8 332 aaPredicted RBP18.71■□□□□ 0.59
SEC23A-203ENST00000545328 ADGRF4Q8IZF3 695 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 MSL3Q8N5Y2 521 aaKnown RBP18.71■□□□□ 0.59
SEC23A-203ENST00000545328 IFT81Q8WYA0 676 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 GOLPH3Q9H4A6 298 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 PANK4Q9NVE7 773 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 MTMR4Q9NYA4 1195 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 FAM184BQ9ULE4 1060 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 KIAA1024Q9UPX6 916 aa18.71■□□□□ 0.59
SEC23A-203ENST00000545328 FAM196BA6NMK8 535 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 SCNN1DP51172 638 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 TLR10Q9BXR5 811 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 PACSIN1Q9BY11 444 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 GGA1Q9UJY5 639 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 CDK5RAP2Q96SN8 1893 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 POTECB2RU33 542 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 PAFAH1B1P43034 410 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 FXR2P51116 673 aaKnown RBP eCLIP18.7■□□□□ 0.582e-7■■■□□ 16
SEC23A-203ENST00000545328 CDK17Q00537 523 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 TRAPPC3LQ5T215 181 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 KCTD16Q68DU8 428 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 C8orf74Q6P047 294 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 FAM76AQ8TAV0 307 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 AENQ8WTP8 325 aaKnown RBP18.7■□□□□ 0.58
SEC23A-203ENST00000545328 NRAPQ86VF7 1730 aa18.7■□□□□ 0.58
SEC23A-203ENST00000545328 PVALEFA0A1B0GWK0 134 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 TLR2O60603 784 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 PPP1R2P41236 205 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 SNAP25P60880 206 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
SEC23A-203ENST00000545328 FAM26FQ5R3K3 315 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 HAUS3Q68CZ6 603 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 FAM133AQ8N9E0 248 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 PROCA1Q8NCQ7 364 aaPredicted RBP18.69■□□□□ 0.58
SEC23A-203ENST00000545328 TBC1D5Q92609 795 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 HAS1Q92839 578 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 JMJD4Q9H9V9 463 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 DDX4Q9NQI0 724 aaKnown RBP18.69■□□□□ 0.58
SEC23A-203ENST00000545328 POLLQ9UGP5 575 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 PALMO75781 387 aa18.69■□□□□ 0.58
SEC23A-203ENST00000545328 HERC4Q5GLZ8 1057 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms