RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CALM3P0DP25 149 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 TAL1P17542 331 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-224ENST00000544990 CALML3P27482 149 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 KIF5BP33176 963 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 LIFRP42702 1097 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 GNAQP50148 359 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 TROAPQ12815 778 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 SYNE3Q6ZMZ3 975 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 RNF180Q86T96 592 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 MCF2L2Q86YR7 1114 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 CLEC4DQ8WXI8 215 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 LZTS2Q9BRK4 669 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 AMNQ9BXJ7 453 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 LY9Q9HBG7 655 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 SPC25Q9HBM1 224 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 XPNPEP3Q9NQH7 507 aa8.55□□□□□ -1.04
CPSF7-224ENST00000544990 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
CPSF7-224ENST00000544990 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 ZBTB5O15062 677 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 COL6A1P12109 1028 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 SMARCA1P28370 1054 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 ALDH5A1P51649 535 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 RPS6P62753 249 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 GJC2Q5T442 439 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 DNERQ8NFT8 737 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 MTMR8Q96EF0 704 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 FGD4Q96M96 766 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 SENP6Q9GZR1 1112 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 RIOX1Q9H6W3 641 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 MAP3K20Q9NYL2 800 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
CPSF7-224ENST00000544990 BAZ2BQ9UIF8 2168 aaKnown RBP8.54□□□□□ -1.04
CPSF7-224ENST00000544990 LCTP09848 1927 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 PNMA6FA0A0J9YX94 578 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 EIF5BO60841 1220 aaKnown RBP8.53□□□□□ -1.04
CPSF7-224ENST00000544990 PGK1P00558 417 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 PSMA5P28066 241 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 HSPA4P34932 840 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 FGD1P98174 961 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 TNFAIP2Q03169 654 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 LRRC41Q15345 812 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 CCDC144BQ3MJ40 725 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 IQSEC1Q6DN90 963 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
CPSF7-224ENST00000544990 SGMS1Q86VZ5 419 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 HOMER1Q86YM7 354 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 MORC4Q8TE76 937 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 PIGSQ96S52 555 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 TSEN34Q9BSV6 310 aaKnown RBP8.53□□□□□ -1.04
CPSF7-224ENST00000544990 LRRC2Q9BYS8 371 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 VTA1Q9NP79 307 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 PCDHA1Q9Y5I3 950 aa8.53□□□□□ -1.04
CPSF7-224ENST00000544990 ALPK3Q96L96 1907 aa8.52□□□□□ -1.04
CPSF7-224ENST00000544990 H0YGN5 161 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 CYTH3O43739 400 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 ATP9BO43861 1147 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 CFBP00751 764 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 EXOSC10Q01780 885 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 ADCK5Q3MIX3 580 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 BLOC1S2Q6QNY1 142 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 SLC30A10Q6XR72 485 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 EEPD1Q7L9B9 569 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 FANCBQ8NB91 859 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 PCSK9Q8NBP7 692 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 NSUN6Q8TEA1 469 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 BAP1Q92560 729 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 KCNB2Q92953 911 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 RRP36Q96EU6 259 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 MYL10Q9BUA6 226 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 SPZ1Q9BXG8 430 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 KATNBL1Q9H079 304 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 AP5M1Q9H0R1 490 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 RBM28Q9NW13 759 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 SEC63Q9UGP8 760 aaKnown RBP8.52□□□□□ -1.05
CPSF7-224ENST00000544990 Q9Y3F1 56 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 BRCA2P51587 3418 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 SYNRGQ9UMZ2 1314 aa8.52□□□□□ -1.05
CPSF7-224ENST00000544990 ZEB2O60315 1214 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 ADAMTS4O75173 837 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 RXRAP19793 462 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 CST5P28325 142 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-224ENST00000544990 ADCYAP1R1P41586 468 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 GJA9P57773 515 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
CPSF7-224ENST00000544990 ARHGEF16Q5VV41 709 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms