RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 ALG3Q92685 438 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 CNTD2Q9H8S5 307 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 CBLCQ9ULV8 474 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 PLAAQ9Y263 795 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 TNPO3Q9Y5L0 923 aaKnown RBP7.66□□□□□ -1.18
LEMD3-205ENST00000544506 CCDC66A2RUB6 948 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 KRIT1O00522 736 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 IRS4O14654 1257 aaPredicted RBP7.65□□□□□ -1.18
LEMD3-205ENST00000544506 NKRFO15226 690 aaKnown RBP eCLIP7.65□□□□□ -1.18
LEMD3-205ENST00000544506 OPA1O60313 960 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 SEMA7AO75326 666 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 TADA3O75528 432 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 ASLP04424 464 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 KCNA6P17658 529 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 DNM2P50570 870 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 CDR1P51861 262 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 ST5P78524 1137 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 FAM47CQ5HY64 1035 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 TMEM132EQ6IEE7 984 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 ABHD17CQ6PCB6 329 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 MILR1Q7Z6M3 343 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
LEMD3-205ENST00000544506 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 SGPP1Q9BX95 441 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 CATSPERZQ9NTU4 200 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 PCDHB4Q9Y5E5 795 aa7.65□□□□□ -1.18
LEMD3-205ENST00000544506 MAFKO60675 156 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 FARP2O94887 1054 aaPredicted RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 FBLN1P23142 703 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 CYP4F22Q6NT55 531 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 SYDE1Q6ZW31 735 aaPredicted RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 C16orf59Q7L2K0 433 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 LDHDQ86WU2 507 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 CISD2Q8N5K1 135 aaKnown RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 UHMK1Q8TAS1 419 aaKnown RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 MFSD3Q96ES6 412 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 FAM84AQ96KN4 292 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 CELF4Q9BZC1 486 aaKnown RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 SMOC1Q9H4F8 434 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 GCM1Q9NP62 436 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 INTS7Q9NVH2 962 aaKnown RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 MAGEC2Q9UBF1 373 aaPredicted RBP7.64□□□□□ -1.19
LEMD3-205ENST00000544506 MYOTQ9UBF9 498 aa7.64□□□□□ -1.19
LEMD3-205ENST00000544506 TCRBV5S4A2TA0A5A2 114 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 SLC27A2O14975 620 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 PMLP29590 882 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 EPHB3P54753 998 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 GYS2P54840 703 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 NCKAP1LP55160 1127 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 GPR19Q15760 415 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 ZNF648Q5T619 568 aaPredicted RBP7.63□□□□□ -1.19
LEMD3-205ENST00000544506 EGFLAMQ63HQ2 1017 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 ZCCHC8Q6NZY4 707 aaKnown RBP7.63□□□□□ -1.19
LEMD3-205ENST00000544506 IGSF22Q8N9C0 903 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 PHOSPHO1Q8TCT1 267 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 ASH2LQ9UBL3 628 aa7.63□□□□□ -1.19
LEMD3-205ENST00000544506 TCRBV5S2A0A599 114 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 B4E1Z4 1266 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 ETV2O00321 342 aaPredicted RBP7.62□□□□□ -1.19
LEMD3-205ENST00000544506 GSTA4O15217 222 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 ASGR2P07307 311 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 PDE6AP16499 860 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 DLG4P78352 724 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 CRY1Q16526 586 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 AMIGO3Q86WK7 504 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 MIB1Q86YT6 1006 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 POU5F2Q8N7G0 328 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 ARRDC4Q8NCT1 418 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 SH3RF2Q8TEC5 729 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 MZB1Q8WU39 189 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 KCNN1Q92952 543 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 SLKQ9H2G2 1235 aaPredicted RBP7.62□□□□□ -1.19
LEMD3-205ENST00000544506 DSEQ9UL01 958 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 PCDHA5Q9Y5H7 936 aa7.62□□□□□ -1.19
LEMD3-205ENST00000544506 CADPSQ9ULU8 1353 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 IRS2Q9Y4H2 1338 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 GLRX3O76003 335 aaKnown RBP7.61□□□□□ -1.19
LEMD3-205ENST00000544506 CLSTN1O94985 981 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 NPTXRO95502 500 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 AMY2AP04746 511 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 JMJD7P0C870 316 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 KRT15P19012 456 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 AMY2BP19961 511 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 MC3RP41968 323 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 JAM2P57087 298 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 TAF7LQ5H9L4 462 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 ARHGAP36Q6ZRI8 547 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 OVCH1Q7RTY7 1134 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 DDX53Q86TM3 631 aaKnown RBP7.61□□□□□ -1.19
LEMD3-205ENST00000544506 LRRTM3Q86VH5 581 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 OSTM1Q86WC4 334 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 IGDCC3Q8IVU1 814 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 RBM12BQ8IXT5 1001 aaKnown RBP7.61□□□□□ -1.19
LEMD3-205ENST00000544506 PANK1Q8TE04 598 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 CD244Q9BZW8 370 aa7.61□□□□□ -1.19
LEMD3-205ENST00000544506 SMURF1Q9HCE7 757 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms