RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 PBX2P40425 430 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 DGKDQ16760 1214 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CELF3Q5SZQ8 465 aaKnown RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 GDF6Q6KF10 455 aaPredicted RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 KCNB2Q92953 911 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 STXBP5LQ9Y2K9 1186 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 SPTBN5Q9NRC6 3674 aaKnown RBP12.34□□□□□ -0.43
CHEK1-218ENST00000544373 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 PIK3CDO00329 1044 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 FGBP02675 491 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 HOXD8P13378 290 aaPredicted RBP12.34□□□□□ -0.43
CHEK1-218ENST00000544373 FUT2Q10981 343 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 HIC1Q14526 733 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 PTGISQ16647 500 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 UBE2SQ16763 222 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 PSRC1Q6PGN9 363 aaPredicted RBP12.34□□□□□ -0.43
CHEK1-218ENST00000544373 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 HERVK_113Q902F9 699 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
CHEK1-218ENST00000544373 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
CHEK1-218ENST00000544373 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 HDAC6Q9UBN7 1215 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 MYH6P13533 1939 aa12.34□□□□□ -0.43
CHEK1-218ENST00000544373 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 TGFB3P10600 412 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 DNAJB2P25686 324 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 CDC27P30260 824 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 HSPA4P34932 840 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 PSEN2P49810 448 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
CHEK1-218ENST00000544373 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
CHEK1-218ENST00000544373 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 KCNV1Q6PIU1 500 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 SYNE3Q6ZMZ3 975 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 NOD1Q9Y239 953 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 CNTNAP5Q8WYK1 1306 aa12.33□□□□□ -0.44
CHEK1-218ENST00000544373 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 HAS3O00219 553 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 ZBTB43O43298 467 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 F2P00734 622 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 ICAM3P32942 547 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 KRT32Q14532 448 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 MFSD10Q14728 455 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 SESTD1Q86VW0 696 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
CHEK1-218ENST00000544373 CUL5Q93034 780 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
CHEK1-218ENST00000544373 C16orf70Q9BSU1 422 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 V9GY48 417 aaPredicted RBP12.32□□□□□ -0.44
CHEK1-218ENST00000544373 CHD7Q9P2D1 2997 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 IQCF3P0C7M6 154 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 ADD1P35611 737 aaKnown RBP12.32□□□□□ -0.44
CHEK1-218ENST00000544373 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHEK1-218ENST00000544373 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 GPNMBQ14956 572 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 RTN1Q16799 776 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 Q6ZUG5 572 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 C7orf31Q8N865 590 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 WNT8BQ93098 351 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 GTF2IRD1Q9UHL9 959 aa12.32□□□□□ -0.44
CHEK1-218ENST00000544373 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 ATP9AO75110 1047 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 ITGB5P18084 799 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 RPUSD2Q8IZ73 545 aaKnown RBP12.31□□□□□ -0.44
CHEK1-218ENST00000544373 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 BRF1Q92994 677 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 TIFAQ96CG3 184 aa12.31□□□□□ -0.44
CHEK1-218ENST00000544373 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
CHEK1-218ENST00000544373 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
CHEK1-218ENST00000544373 FIBPO43427 364 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 STAM2O75886 525 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 LGALS2P05162 132 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 NEFLP07196 543 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
CHEK1-218ENST00000544373 RABGGTBP53611 331 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 SP4Q02446 784 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms