RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GRAMD1CQ8IYS0 662 aa34.25■■■■□ 3.07
CCM2-219ENST00000544363 SNX29Q8TEQ0 813 aa34.25■■■■□ 3.07
CCM2-219ENST00000544363 NR3C2P08235 984 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 PLCG1P19174 1290 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 GCLCP48506 637 aaPredicted RBP34.24■■■■□ 3.07
CCM2-219ENST00000544363 VSIG10LQ86VR7 867 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 DNERQ8NFT8 737 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 ZNF577Q9BSK1 485 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 CUEDC2Q9H467 287 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 GRPEL1Q9HAV7 217 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 VAV3Q9UKW4 847 aa34.24■■■■□ 3.07
CCM2-219ENST00000544363 MANSC4A6NHS7 340 aaPredicted RBP34.23■■■■□ 3.07
CCM2-219ENST00000544363 SHCBP1Q8NEM2 672 aa34.23■■■■□ 3.07
CCM2-219ENST00000544363 PLIN2Q99541 437 aa34.23■■■■□ 3.07
CCM2-219ENST00000544363 WDR11Q9BZH6 1224 aa34.23■■■■□ 3.07
CCM2-219ENST00000544363 MROH8Q9H579 483 aa34.23■■■■□ 3.07
CCM2-219ENST00000544363 SLC26A4O43511 780 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 PSMD10O75832 226 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 PRR29P0C7W0 189 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 AFMP43652 599 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 GRB10Q13322 594 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 STX1AQ16623 288 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 LRCH2Q5VUJ6 765 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 GPRC5AQ8NFJ5 357 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 PARK7Q99497 189 aaKnown RBP34.22■■■■□ 3.07
CCM2-219ENST00000544363 NUDT12Q9BQG2 462 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 R3HDMLQ9H3Y0 253 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 KCNH7Q9NS40 1196 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 PCDHA5Q9Y5H7 936 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 SLC10A3P09131 477 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 MRE11P49959 708 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 CDK5RAP3Q96JB5 506 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 PNMA5Q96PV4 448 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 STK24Q9Y6E0 443 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 LCTP09848 1927 aa34.22■■■■□ 3.07
CCM2-219ENST00000544363 L1TD1Q5T7N2 865 aaKnown RBP34.21■■■■□ 3.07
CCM2-219ENST00000544363 IWS1Q96ST2 819 aa34.21■■■■□ 3.07
CCM2-219ENST00000544363 ANO10Q9NW15 660 aa34.21■■■■□ 3.07
CCM2-219ENST00000544363 POTEB2H3BUK9 544 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 IPO5O00410 1097 aaKnown RBP34.2■■■■□ 3.07
CCM2-219ENST00000544363 CCNA1P78396 465 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 CNTN2Q02246 1040 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 MTMR1Q13613 665 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 NCAPH2Q6IBW4 605 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 OTOP1Q7RTM1 612 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 LRRC15Q8TF66 581 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 RIT2Q99578 217 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 MAGEF1Q9HAY2 307 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 MORF4L1Q9UBU8 362 aa34.2■■■■□ 3.07
CCM2-219ENST00000544363 KDM3AQ9Y4C1 1321 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 GAS7O60861 476 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 TOMM70O94826 608 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 ANO6Q4KMQ2 910 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 HYIQ5T013 277 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 NT5DC1Q5TFE4 455 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 ANKRD13CQ8N6S4 541 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 MTRQ99707 1265 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 CCT6AP40227 531 aaKnown RBP34.19■■■■□ 3.06
CCM2-219ENST00000544363 SARSP49591 514 aaKnown RBP34.19■■■■□ 3.06
CCM2-219ENST00000544363 PPP2R5CQ13362 524 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 TMEM119Q4V9L6 283 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 ERMNQ8TAM6 284 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 SPATA20Q8TB22 786 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 SMARCE1Q969G3 411 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 AGO4Q9HCK5 861 aaKnown RBP34.19■■■■□ 3.06
CCM2-219ENST00000544363 STK17AQ9UEE5 414 aa34.19■■■■□ 3.06
CCM2-219ENST00000544363 STAM2O75886 525 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 SMC2O95347 1197 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 HAUS3Q68CZ6 603 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 FAM133AQ8N9E0 248 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 RNF214Q8ND24 703 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 STAMQ92783 540 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 MMP19Q99542 508 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 TEKT3Q9BXF9 490 aa34.18■■■■□ 3.06
CCM2-219ENST00000544363 ADD3Q9UEY8 706 aaKnown RBP34.18■■■■□ 3.06
CCM2-219ENST00000544363 A0A087WWV3 80 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 TMEM88BA6NKF7 163 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 BIN1O00499 593 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 GTPBP6O43824 516 aaPredicted RBP34.17■■■■□ 3.06
CCM2-219ENST00000544363 NLRP12P59046 1061 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 DPYDQ12882 1025 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 KCTD2Q14681 263 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 CCDC102AQ96A19 550 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 GPRASP2Q96D09 838 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 NT5C3AQ9H0P0 336 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 PORCNQ9H237 461 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 ZCCHC17Q9NP64 241 aaKnown RBP34.17■■■■□ 3.06
CCM2-219ENST00000544363 KBTBD4Q9NVX7 518 aa34.17■■■■□ 3.06
CCM2-219ENST00000544363 ABT1Q9ULW3 272 aaKnown RBP34.17■■■■□ 3.06
CCM2-219ENST00000544363 ASTN1O14525 1302 aa34.16■■■■□ 3.06
CCM2-219ENST00000544363 ALDH5A1P51649 535 aaPredicted RBP34.16■■■■□ 3.06
CCM2-219ENST00000544363 NLRX1Q86UT6 975 aa34.16■■■■□ 3.06
CCM2-219ENST00000544363 INPP4AQ96PE3 977 aaPredicted RBP34.16■■■■□ 3.06
CCM2-219ENST00000544363 DNAJC25Q9H1X3 360 aa34.16■■■■□ 3.06
CCM2-219ENST00000544363 FAM155AB1AL88 458 aaPredicted RBP34.15■■■■□ 3.06
CCM2-219ENST00000544363 MAFGO15525 162 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 CAVIN2O95810 425 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 FCER1AP12319 257 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 ECM1Q16610 540 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 WDR78Q5VTH9 848 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms