RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 TAAR1Q96RJ0 339 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 PXMP2Q9NR77 195 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 ZHX1Q9UKY1 873 aaPredicted RBP11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 ADGRG1Q9Y653 693 aa11.13□□□□□ -0.63
RIMKLB-212ENST00000544257 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 RBM47A0AV96 593 aaKnown RBP11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 ESYT2A0FGR8 921 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 STXBP3O00186 592 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 MEIS2O14770 477 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 DUSP11O75319 330 aaKnown RBP11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 RARBP10826 455 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 SCRN1Q12765 414 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 PKN1Q16512 942 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 ARHGEF16Q5VV41 709 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 CCDC12Q8WUD4 166 aaPredicted RBP11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 STK36Q9NRP7 1315 aa11.12□□□□□ -0.63
RIMKLB-212ENST00000544257 FARP2O94887 1054 aaPredicted RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 NAPAP54920 295 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 NKX3-2P78367 333 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 KCNC4Q03721 635 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 STXBP2Q15833 593 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 TAPT1Q6NXT6 567 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 XRRA1Q6P2D8 792 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 PHKBQ93100 1093 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 Q9Y3F1 56 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 DNM1LO00429 736 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 EIF3JO75822 258 aaKnown RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 STAM2O75886 525 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 DEXIO95424 95 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 NR3C2P08235 984 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 ADCY7P51828 1080 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 STK3Q13188 491 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 HIC1Q14526 733 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 PGM5Q15124 567 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 ME3Q16798 604 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 MCTP2Q6DN12 878 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 CCDC148Q8NFR7 591 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SCFD2Q8WU76 684 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
RIMKLB-212ENST00000544257 SMCO2A6NFE2 343 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 NKRFO15226 690 aaKnown RBP eCLIP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 COL6A1P12109 1028 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 EIF2AK2P19525 551 aaKnown RBP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 DNAJB2P25686 324 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 CCND2P30279 289 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 GJA9P57773 515 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 TNFAIP2Q03169 654 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 AP3B2Q13367 1082 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 NECAB2Q7Z6G3 386 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 RNF180Q86T96 592 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 SH2B1Q9NRF2 756 aaPredicted RBP11.1□□□□□ -0.63
RIMKLB-212ENST00000544257 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 ADCY6O43306 1168 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 LARGE1O95461 756 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 SMPD1P17405 629 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 GNA11P29992 359 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 ADCYAP1R1P41586 468 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 CLK2P49760 499 aaKnown RBP11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 LRRC41Q15345 812 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 KCNV1Q6PIU1 500 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 KLHDC9Q8NEP7 349 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
RIMKLB-212ENST00000544257 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms