RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 RAB33AQ14088 237 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 TTLL7Q6ZT98 887 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 USP53Q70EK8 1073 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 GORASP1Q9BQQ3 440 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 YIPF4Q9BSR8 244 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 SPATA6Q9NWH7 488 aaPredicted RBP5.45□□□□□ -1.54
CCDC170-203ENST00000544131 MYRFQ9Y2G1 1151 aa5.45□□□□□ -1.54
CCDC170-203ENST00000544131 SH3D21A4FU49 640 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 HGSO14964 777 aaPredicted RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 SARSP49591 514 aaKnown RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 DLX2Q07687 328 aaPredicted RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 TESK1Q15569 626 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 UBXN11Q5T124 520 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 ZFYVE27Q5T4F4 411 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 NT5DC1Q5TFE4 455 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 ZC3H18Q86VM9 953 aaKnown RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 MIB1Q86YT6 1006 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 CKAP2LQ8IYA6 745 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 CARFQ8N187 725 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 Q8N1Y9 231 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 SGSM3Q96HU1 749 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 AARSD1Q9BTE6 412 aaKnown RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
CCDC170-203ENST00000544131 JAM3Q9BX67 310 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 USP40Q9NVE5 1235 aa5.44□□□□□ -1.54
CCDC170-203ENST00000544131 U2SURPO15042 1029 aaKnown RBP5.43□□□□□ -1.54
CCDC170-203ENST00000544131 MSCO60682 206 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 DGKIO75912 1065 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 CHRNA2Q15822 529 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 STEAP3Q658P3 488 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 FAM126BQ8IXS8 530 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 GPR20Q99678 358 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 PHF20Q9BVI0 1012 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 TANGO6Q9C0B7 1094 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 ARHGEF4Q9NR80 690 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 NTMQ9P121 344 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 PPARGC1AQ9UBK2 798 aaKnown RBP5.43□□□□□ -1.54
CCDC170-203ENST00000544131 CNOT11Q9UKZ1 510 aaKnown RBP5.43□□□□□ -1.54
CCDC170-203ENST00000544131 NPFFR2Q9Y5X5 522 aa5.43□□□□□ -1.54
CCDC170-203ENST00000544131 BLACEA4D250 179 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 CCDC85CA6NKD9 419 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 PABPC1P11940 636 aaKnown RBP5.42□□□□□ -1.54
CCDC170-203ENST00000544131 ATP2B1P20020 1258 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 NKX3-2P78367 333 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 ZNF827Q17R98 1081 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 KCNT2Q6UVM3 1135 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 NSMFQ6X4W1 530 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 FERMT3Q86UX7 667 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 KYQ8NBH2 561 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 ARRDC4Q8NCT1 418 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 ST13P5Q8NFI4 369 aaPredicted RBP5.42□□□□□ -1.54
CCDC170-203ENST00000544131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCDC170-203ENST00000544131 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
CCDC170-203ENST00000544131 EPB41L1Q9H4G0 881 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 PCDH18Q9HCL0 1135 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 GPR27Q9NS67 375 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 PCDHB4Q9Y5E5 795 aa5.42□□□□□ -1.54
CCDC170-203ENST00000544131 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 TCRBV5S2A0A599 114 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 TADA3O75528 432 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 FGFR1P11362 822 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 IFRD2Q12894 506 aaPredicted RBP5.41□□□□□ -1.54
CCDC170-203ENST00000544131 CR1LQ2VPA4 569 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 YOD1Q5VVQ6 348 aaPredicted RBP5.41□□□□□ -1.54
CCDC170-203ENST00000544131 LRRC47Q8N1G4 583 aaKnown RBP5.41□□□□□ -1.54
CCDC170-203ENST00000544131 DCAF4Q8WV16 495 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 OSBP2Q969R2 916 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 NGRNQ9NPE2 291 aaKnown RBP5.41□□□□□ -1.54
CCDC170-203ENST00000544131 ZNF652Q9Y2D9 606 aa5.41□□□□□ -1.54
CCDC170-203ENST00000544131 GTF2F1P35269 517 aaKnown RBP eCLIP5.4□□□□□ -1.54
CCDC170-203ENST00000544131 THBS2P35442 1172 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 ITGA1P56199 1179 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 NTRK3Q16288 839 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 RSPO2Q6UXX9 243 aaPredicted RBP5.4□□□□□ -1.54
CCDC170-203ENST00000544131 SPATC1Q76KD6 591 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 TTLL6Q8N841 843 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 TOE1Q96GM8 510 aaKnown RBP5.4□□□□□ -1.54
CCDC170-203ENST00000544131 KCNJ15Q99712 375 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 SPATA9Q9BWV2 254 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 MYOTQ9UBF9 498 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 PFDN2Q9UHV9 154 aa5.4□□□□□ -1.54
CCDC170-203ENST00000544131 KRIT1O00522 736 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 DDX3XO00571 662 aaKnown RBP eCLIP5.39□□□□□ -1.55
CCDC170-203ENST00000544131 SLC27A2O14975 620 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 PDPK1O15530 556 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 NOBOXO60393 691 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 COL6A2P12110 1019 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 RPL13P26373 211 aaKnown RBP5.39□□□□□ -1.55
CCDC170-203ENST00000544131 MAGEA10P43363 369 aaPredicted RBP5.39□□□□□ -1.55
CCDC170-203ENST00000544131 GJA9P57773 515 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 MCTP2Q6DN12 878 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 ZNF761Q86XN6 746 aaPredicted RBP5.39□□□□□ -1.55
CCDC170-203ENST00000544131 RBM12BQ8IXT5 1001 aaKnown RBP5.39□□□□□ -1.55
CCDC170-203ENST00000544131 PIP4K2CQ8TBX8 421 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 ADAMTS17Q8TE56 1095 aa5.39□□□□□ -1.55
CCDC170-203ENST00000544131 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms