RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 RNF180Q86T96 592 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 TBCKQ8TEA7 893 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 TNFRSF25Q93038 417 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 GPRASP2Q96D09 838 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 PAWRQ96IZ0 340 aaKnown RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 JADE2Q9NQC1 790 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
CD9-210ENST00000543916 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
CD9-210ENST00000543916 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 SORBS3O60504 671 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 GH1P01241 217 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 TGFB3P10600 412 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 COL6A1P12109 1028 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 RGS19P49795 217 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 MTMR1Q13613 665 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 NONOQ15233 471 aaKnown RBP eCLIP17.2■□□□□ 0.34
CD9-210ENST00000543916 KCNA10Q16322 511 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 KRT25Q7Z3Z0 450 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
CD9-210ENST00000543916 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 MEIS1O00470 390 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 TNRC18O15417 2968 aaPredicted RBP17.19■□□□□ 0.34
CD9-210ENST00000543916 ATP9AO75110 1047 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 GGPS1O95749 300 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 ARP10275 920 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 ZNF76P36508 570 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
CD9-210ENST00000543916 INF2Q27J81 1249 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 GNASQ5JWF2 1037 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 PHF24Q9UPV7 400 aa17.19■□□□□ 0.34
CD9-210ENST00000543916 ASGR1P07306 291 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 KCNA2P16389 499 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 CIITAP33076 1130 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 ACLYP53396 1101 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 CELF3Q5SZQ8 465 aaKnown RBP17.18■□□□□ 0.34
CD9-210ENST00000543916 MYSM1Q5VVJ2 828 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 PIK3AP1Q6ZUJ8 805 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 NECAB2Q7Z6G3 386 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 DHX37Q8IY37 1157 aaKnown RBP17.18■□□□□ 0.34
CD9-210ENST00000543916 AFG1LQ8WV93 481 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 EMID1Q96A84 441 aaPredicted RBP17.18■□□□□ 0.34
CD9-210ENST00000543916 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 TSEN34Q9BSV6 310 aaKnown RBP17.18■□□□□ 0.34
CD9-210ENST00000543916 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 PKD2L1Q9P0L9 805 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 KIF3AQ9Y496 699 aa17.18■□□□□ 0.34
CD9-210ENST00000543916 A0A1W2PQ45 241 aaPredicted RBP17.17■□□□□ 0.34
CD9-210ENST00000543916 A0A1W2PQY0 241 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 A6NJR5 290 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 CPT1AP50416 773 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 USP11P51784 963 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 CYFIP1Q7L576 1253 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
CD9-210ENST00000543916 LENG9Q96B70 501 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 CDHR1Q96JP9 859 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 SENP7Q9BQF6 1050 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 TELO2Q9Y4R8 837 aa17.17■□□□□ 0.34
CD9-210ENST00000543916 MOXD2PA6NHM9 499 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 TDP2O95551 362 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 MMP3P08254 477 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
CD9-210ENST00000543916 LAMC2Q13753 1193 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 NEDD9Q14511 834 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 SAFBQ15424 915 aaKnown RBP eCLIP17.16■□□□□ 0.34
CD9-210ENST00000543916 HSDL1Q3SXM5 330 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 PRR16Q569H4 304 aa17.16■□□□□ 0.34
CD9-210ENST00000543916 INTS4Q96HW7 963 aaKnown RBP17.16■□□□□ 0.34
CD9-210ENST00000543916 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
CD9-210ENST00000543916 AGO4Q9HCK5 861 aaKnown RBP17.16■□□□□ 0.34
CD9-210ENST00000543916 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
CD9-210ENST00000543916 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 MAFGO15525 162 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 CYP3A7P24462 503 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
CD9-210ENST00000543916 LETM2Q2VYF4 491 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
CD9-210ENST00000543916 CXCL17Q6UXB2 119 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms