RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 ICA1Q05084 483 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 ELOAQ14241 798 aaKnown RBP5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 GPNMBQ14956 572 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 CCDC158Q5M9N0 1113 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 TTC39AQ5SRH9 613 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 FAM83BQ5T0W9 1011 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 TMEM63BQ5T3F8 832 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 SNRNP48Q6IEG0 339 aaKnown RBP5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 ERMP1Q7Z2K6 904 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 EDAQ92838 391 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 TGS1Q96RS0 853 aaKnown RBP5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 PRRX2Q99811 253 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 DBNDD2Q9BQY9 259 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 UPF3BQ9BZI7 483 aaKnown RBP5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 FAM86C1Q9NVL1 165 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 MCM9Q9NXL9 1143 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 MUTYHQ9UIF7 546 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 MTUS1Q9ULD2 1270 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 HDAC5Q9UQL6 1122 aa5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 EP300Q09472 2414 aaPredicted RBP5.83□□□□□ -1.48
NPIPB4-219ENST00000543660 PTPRSQ13332 1948 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 ACACBO00763 2458 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 ZNF292O60281 2723 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 ZEB2O60315 1214 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 IDH1O75874 414 aaKnown RBP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 DXOO77932 396 aaKnown RBP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 BAIAP3O94812 1187 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 GJB5O95377 273 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 CYP2D6P10635 497 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 EEF2P13639 858 aaKnown RBP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 WDR5P61964 334 aaKnown RBP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 DEFB103AP81534 67 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 CNTN2Q02246 1040 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 PKN1Q16512 942 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 TNNI3KQ59H18 835 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 TAPT1Q6NXT6 567 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 RNF135Q8IUD6 432 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 ANKRD35Q8N283 1001 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 FAM133AQ8N9E0 248 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 DYNLL2Q96FJ2 89 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 RAD9AQ99638 391 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 FTOQ9C0B1 505 aaKnown RBP eCLIP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 AP5M1Q9H0R1 490 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 GPR108Q9NPR9 543 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 PDGFCQ9NRA1 345 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 LIMD1Q9UGP4 676 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 SWAP70Q9UH65 585 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 Q9Y3F1 56 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 MAFBQ9Y5Q3 323 aaPredicted RBP5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 FPGT-TNNI3KV9GXZ4 949 aa5.82□□□□□ -1.48
NPIPB4-219ENST00000543660 PNMA6EA0A0J9YXQ4 647 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 TMEM221A6NGB7 291 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 PROB1E7EW31 1015 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 H3BM21 787 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 M0R296 226 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 CLSTN1O94985 981 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 LTBRP36941 435 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 KCNJ6P48051 423 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 PURAQ00577 322 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 G3BP1Q13283 466 aaKnown RBP eCLIP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 SMAD2Q15796 467 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 TCTN1Q2MV58 587 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 IQSEC1Q6DN90 963 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 TMED8Q6PL24 325 aaPredicted RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 ASCL5Q7RTU5 278 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 NOP9Q86U38 636 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 CPXCR1Q8N123 301 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 PNMA1Q8ND90 353 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 ZNF592Q92610 1267 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 PABPC5Q96DU9 382 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 MRPL38Q96DV4 380 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 CCDC17Q96LX7 622 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 NUP88Q99567 741 aaPredicted RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 USB1Q9BQ65 265 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 SLF1Q9BQI6 1058 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 C17orf80Q9BSJ5 609 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 RAVER2Q9HCJ3 691 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 DCP1AQ9NPI6 582 aaPredicted RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 TFIP11Q9UBB9 837 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 FAM50BQ9Y247 325 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 DDX49Q9Y6V7 483 aaKnown RBP5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 DMXL1Q9Y485 3027 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 CHD6Q8TD26 2715 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 CFAP47Q6ZTR5 3102 aa5.81□□□□□ -1.48
NPIPB4-219ENST00000543660 MAGEB6P1A0A0J9YX57 407 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 KRT37O76014 449 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 ERCC5P28715 1186 aaPredicted RBP5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 CDK8P49336 464 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 SEMA3FQ13275 785 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 SUZ12Q15022 739 aaKnown RBP5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 NBPF20Q3BBV1 942 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 ALDH1L2Q3SY69 923 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 TCEAL5Q5H9L2 206 aa5.8□□□□□ -1.48
NPIPB4-219ENST00000543660 SUGP1Q8IWZ8 645 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms