RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 CYFIP1Q7L576 1253 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
DDB1-222ENST00000543627 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 BADQ92934 168 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 TRIM43BA6NCK2 446 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 A6NJR5 290 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 FIBPO43427 364 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 KPNA6O60684 536 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 PFKFB2O60825 505 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 STAM2O75886 525 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 CDKL5O76039 1030 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 DEXIO95424 95 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 LARGE1O95461 756 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 FOSP01100 380 aaPredicted RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 ZNF286BP0CG31 522 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 UBA1P22314 1058 aaKnown RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 GNA11P29992 359 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 DGKDQ16760 1214 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 ME3Q16798 604 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 CELF3Q5SZQ8 465 aaKnown RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 TRIM43Q96BQ3 446 aaPredicted RBP12.63□□□□□ -0.39
DDB1-222ENST00000543627 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 TRPV6Q9H1D0 765 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
DDB1-222ENST00000543627 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 SPATA31C2B4DYI2 1134 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 TGFB3P10600 412 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 NKX3-2P78367 333 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 MTMR1Q13613 665 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 NEDD9Q14511 834 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 SNX17Q15036 470 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 XRRA1Q6P2D8 792 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 REXO1Q8N1G1 1221 aaKnown RBP12.62□□□□□ -0.39
DDB1-222ENST00000543627 CYP2W1Q8TAV3 490 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 BICD2Q8TD16 824 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
DDB1-222ENST00000543627 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
DDB1-222ENST00000543627 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
DDB1-222ENST00000543627 MYH7BA7E2Y1 1941 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 NID2Q14112 1375 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
DDB1-222ENST00000543627 B4GALT4O60513 344 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 ATP9AO75110 1047 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 ITGB5P18084 799 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 CDK7P50613 346 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 AP3B2Q13367 1082 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
DDB1-222ENST00000543627 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 ANKRD33Q7Z3H0 272 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 C7orf31Q8N865 590 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 TOX2Q96NM4 488 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 INPP4AQ96PE3 977 aaPredicted RBP12.61□□□□□ -0.39
DDB1-222ENST00000543627 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 ZMYND12Q9H0C1 365 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
DDB1-222ENST00000543627 CEP290O15078 2479 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 FRMPD4Q14CM0 1322 aa12.61□□□□□ -0.39
DDB1-222ENST00000543627 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 ARP10275 920 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 CYP2C9P11712 490 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 XBP1P17861 261 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 ITGB8P26012 769 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 ICAM3P32942 547 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 PSEN2P49810 448 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 CCL23P55773 120 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 MFSD10Q14728 455 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 CCDC83Q8IWF9 413 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 GPRASP2Q96D09 838 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 TELO2Q9Y4R8 837 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
DDB1-222ENST00000543627 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 JAK2O60674 1132 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 CTDNEP1O95476 244 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 CYP2C18P33260 490 aa12.59□□□□□ -0.39
DDB1-222ENST00000543627 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
DDB1-222ENST00000543627 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms