RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
PPME1-208ENST00000543525 VIPAS39Q9H9C1 493 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
PPME1-208ENST00000543525 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
PPME1-208ENST00000543525 STK32BQ9NY57 414 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 ADAM21Q9UKJ8 722 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 JRKLQ9Y4A0 524 aa14.95□□□□□ -0.02
PPME1-208ENST00000543525 F8W031 263 aaPredicted RBP14.94□□□□□ -0.02
PPME1-208ENST00000543525 KIF11P52732 1056 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 COASYQ13057 564 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 HYIQ5T013 277 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 FAM71BQ8TC56 605 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 SH2D4AQ9H788 454 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 PSTPIP2Q9H939 334 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 PANK4Q9NVE7 773 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 ARHGAP20Q9P2F6 1191 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 PCDHA12Q9UN75 941 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 LRRC37AA6NMS7 1700 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 MPHOSPH10O00566 681 aaKnown RBP14.94□□□□□ -0.02
PPME1-208ENST00000543525 ZNF263O14978 683 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 AKR1B10O60218 316 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 PPP1R11O60927 126 aaPredicted RBP14.94□□□□□ -0.02
PPME1-208ENST00000543525 SHMT1P34896 483 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 TTBK2Q6IQ55 1244 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 PDXDC1Q6P996 788 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 RRAGAQ7L523 313 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 KCNK18Q7Z418 384 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 CLEC10AQ8IUN9 316 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 HAS1Q92839 578 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 CCDC17Q96LX7 622 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 ALS2CR12Q96Q35 445 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 ZC3H12CQ9C0D7 883 aaKnown RBP14.94□□□□□ -0.02
PPME1-208ENST00000543525 NUCKS1Q9H1E3 243 aaKnown RBP14.94□□□□□ -0.02
PPME1-208ENST00000543525 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 VPS18Q9P253 973 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 COL4A3BPQ9Y5P4 624 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 DUSP10Q9Y6W6 482 aa14.94□□□□□ -0.02
PPME1-208ENST00000543525 UBR3Q6ZT12 1888 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 LRRC53A6NM62 1247 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
PPME1-208ENST00000543525 NKRFO15226 690 aaKnown RBP eCLIP14.93□□□□□ -0.02
PPME1-208ENST00000543525 GNA14O95837 355 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 PLEKP08567 350 aaPredicted RBP14.93□□□□□ -0.02
PPME1-208ENST00000543525 PRLRP16471 622 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 FKBP3Q00688 224 aaKnown RBP14.93□□□□□ -0.02
PPME1-208ENST00000543525 ATP2B2Q01814 1243 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 DDR1Q08345 913 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 LRRC41Q15345 812 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 CCDC40Q4G0X9 1142 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 FAM26FQ5R3K3 315 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 CACNA2D4Q7Z3S7 1137 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 KRT26Q7Z3Y9 468 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 CCDC65Q8IXS2 484 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 CCDC102AQ96A19 550 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 DNAJC19Q96DA6 116 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 CEP63Q96MT8 703 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 TANGO6Q9C0B7 1094 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 MED4Q9NPJ6 270 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 SNX12Q9UMY4 172 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 LTBP1Q14766 1721 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 QSER1Q2KHR3 1735 aa14.93□□□□□ -0.02
PPME1-208ENST00000543525 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 EPHB6O15197 1021 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 ECM1Q16610 540 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 HHIPL2Q6UWX4 724 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 BAP1Q92560 729 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 SSU72P8A0A1W2PR75 194 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 TRAF5O00463 557 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 PJA2O43164 708 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 SSBP05455 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
PPME1-208ENST00000543525 SLC16A2P36021 539 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 MAGEA1P43355 309 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 TNNT3P45378 269 aaPredicted RBP14.92□□□□□ -0.02
PPME1-208ENST00000543525 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
PPME1-208ENST00000543525 ZCWPW2Q504Y3 356 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 KCTD1Q719H9 257 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 CERS5Q8N5B7 392 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 RUBCNQ92622 972 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 EHD4Q9H223 541 aa14.92□□□□□ -0.02
PPME1-208ENST00000543525 LRRIQ3A6PVS8 624 aaPredicted RBP14.91□□□□□ -0.02
PPME1-208ENST00000543525 LMAN1P49257 510 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 USP11P51784 963 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 GYS2P54840 703 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 HNRNPH2P55795 449 aaKnown RBP14.91□□□□□ -0.02
PPME1-208ENST00000543525 ITIH3Q06033 890 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 CDC42EP5Q6NZY7 148 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 ZNF572Q7Z3I7 529 aaPredicted RBP14.91□□□□□ -0.02
PPME1-208ENST00000543525 MMGT1Q8N4V1 131 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 SYN2Q92777 582 aaPredicted RBP14.91□□□□□ -0.02
PPME1-208ENST00000543525 TEKT1Q969V4 418 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
PPME1-208ENST00000543525 CEP72Q9P209 647 aa14.91□□□□□ -0.02
PPME1-208ENST00000543525 HYOU1Q9Y4L1 999 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms