RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NOP53Q9NZM5 478 aaKnown RBP21.08■□□□□ 0.97
SUDS3-204ENST00000543473 DDX39AO00148 427 aaKnown RBP21.08■□□□□ 0.96
SUDS3-204ENST00000543473 PHBP35232 272 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 PRR16Q569H4 304 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 NIM1KQ8IY84 436 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 LCORLQ8N3X6 602 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 BBOF1Q8ND07 529 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 ELAC2Q9BQ52 826 aaKnown RBP21.08■□□□□ 0.96
SUDS3-204ENST00000543473 PSD3Q9NYI0 1048 aa21.08■□□□□ 0.96
SUDS3-204ENST00000543473 LARSQ9P2J5 1176 aaKnown RBP21.08■□□□□ 0.96
SUDS3-204ENST00000543473 PSMD6Q15008 389 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 ARHGEF18Q6ZSZ5 1173 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 METTL16Q86W50 562 aaKnown RBP21.07■□□□□ 0.96
SUDS3-204ENST00000543473 ARHGEF10LQ9HCE6 1279 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 KIF28PB7ZC32 967 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 RXRBP28702 533 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 KIAA0825Q8IV33 1275 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 IL25Q9H293 177 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 STK17AQ9UEE5 414 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 DLGAP5Q15398 846 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
SUDS3-204ENST00000543473 PSMD1Q99460 953 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 ATP1A1P05023 1023 aaKnown RBP21.07■□□□□ 0.96
SUDS3-204ENST00000543473 C10orf76Q5T2E6 689 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 SCYL3Q8IZE3 742 aa21.07■□□□□ 0.96
SUDS3-204ENST00000543473 GMNCA6NCL1 334 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 POC1B-GALNT4F8VUJ3 575 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 AFPP02771 609 aaKnown RBP21.06■□□□□ 0.96
SUDS3-204ENST00000543473 SCNN1DP51172 638 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 FAM178BQ8IXR5 827 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 ANKRD35Q8N283 1001 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 ZMYND12Q9H0C1 365 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 VIPAS39Q9H9C1 493 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
SUDS3-204ENST00000543473 ESYT3A0FGR9 886 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 TARSL2A2RTX5 802 aaKnown RBP21.06■□□□□ 0.96
SUDS3-204ENST00000543473 CCDC188H7C350 402 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 CCHCR1Q8TD31 782 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 KIFC2Q96AC6 838 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 OSBPL9Q96SU4 736 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 TRIM6Q9C030 488 aaPredicted RBP21.06■□□□□ 0.96
SUDS3-204ENST00000543473 MLXIPQ9HAP2 919 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 XDHP47989 1333 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 PRCPP42785 496 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 PPM1KQ8N3J5 372 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.06■□□□□ 0.96
SUDS3-204ENST00000543473 SPZ1Q9BXG8 430 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 STK36Q9NRP7 1315 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 CFBP00751 764 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 PLA2G4AP47712 749 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 IRX4P78413 519 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 STOX1Q6ZVD7 989 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 NCAPGQ9BPX3 1015 aa21.06■□□□□ 0.96
SUDS3-204ENST00000543473 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.05■□□□□ 0.96
SUDS3-204ENST00000543473 PALMO75781 387 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 SLMAPQ14BN4 828 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 NLRP14Q86W24 1093 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 CFAP57Q96MR6 1250 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 SH2D4BQ5SQS7 431 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 NFRKBQ6P4R8 1299 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 ALKBH5Q6P6C2 394 aaKnown RBP21.05■□□□□ 0.96
SUDS3-204ENST00000543473 SLFN12Q8IYM2 578 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 SMC1BQ8NDV3 1235 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 STRBPQ96SI9 672 aaKnown RBP21.05■□□□□ 0.96
SUDS3-204ENST00000543473 TXLNGQ9NUQ3 528 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 PRDM4Q9UKN5 801 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 MMEP08473 750 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 NUGGCQ68CJ6 796 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 PIH1D3Q9NQM4 214 aaKnown RBP21.05■□□□□ 0.96
SUDS3-204ENST00000543473 ZNF148Q9UQR1 794 aa21.05■□□□□ 0.96
SUDS3-204ENST00000543473 N4BP1O75113 896 aaKnown RBP21.04■□□□□ 0.96
SUDS3-204ENST00000543473 HSPA6P17066 643 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 DR1Q01658 176 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 C6orf118Q5T5N4 469 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 TBCKQ8TEA7 893 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 LRRC63Q05C16 580 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 H2AFXP16104 143 aaPredicted RBP21.04■□□□□ 0.96
SUDS3-204ENST00000543473 CDC27P30260 824 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 GBP7Q8N8V2 638 aaPredicted RBP21.04■□□□□ 0.96
SUDS3-204ENST00000543473 CNKSR1Q969H4 720 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 RAB20Q9NX57 234 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 LEMD3Q9Y2U8 911 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 CPS1P31327 1500 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 LOC102724159A0A0B4J2E5 919 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 GAS7O60861 476 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 ATF7P17544 494 aaPredicted RBP21.04■□□□□ 0.96
SUDS3-204ENST00000543473 PWP2Q15269 919 aaKnown RBP21.04■□□□□ 0.96
SUDS3-204ENST00000543473 RSAD2Q8WXG1 361 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 FUCA2Q9BTY2 467 aa21.04■□□□□ 0.96
SUDS3-204ENST00000543473 BTDP43251 543 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 TRPC3Q13507 836 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 MAP3K21Q5TCX8 1036 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 CEP120Q8N960 986 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 TC2NQ8N9U0 490 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 OXER1Q8TDS5 423 aa21.03■□□□□ 0.96
SUDS3-204ENST00000543473 NUF2Q9BZD4 464 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms