RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PPFIA4O75335 1185 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 GGPS1O95749 300 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 F2P00734 622 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TYW1BQ6NUM6 668 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 FBXL16Q8N461 479 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SCLYQ96I15 445 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PSTPIP2Q9H939 334 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CNTNAP5Q8WYK1 1306 aa15.11■□□□□ 0.01
TNFRSF1A-215ENST00000543359 REV3LO60673 3130 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 GRXCR1A8MXD5 290 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 ZBTB43O43298 467 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 STAM2O75886 525 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CDC27P30260 824 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PSEN2P49810 448 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HIC1Q14526 733 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 GPNMBQ14956 572 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 FAM47CQ5HY64 1035 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 FAM161BQ96MY7 647 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 C16orf70Q9BSU1 422 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 RBM28Q9NW13 759 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 TELO2Q9Y4R8 837 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
TNFRSF1A-215ENST00000543359 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SORBS3O60504 671 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 FGBP02675 491 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 ZNF286BP0CG31 522 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 RCAN1P53805 252 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 PTGISQ16647 500 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 RTN1Q16799 776 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 ZNF697Q5TEC3 545 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 WWC2Q6AWC2 1192 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 SPATA33Q96N06 139 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 AGXT2Q9BYV1 514 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 GTF2IRD1Q9UHL9 959 aa15.09■□□□□ 0.01
TNFRSF1A-215ENST00000543359 IQCF3P0C7M6 154 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 ADD1P35611 737 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 PBX2P40425 430 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 MFSD10Q14728 455 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 UBE2SQ16763 222 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 KIAA0753Q2KHM9 967 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 METTL7BQ6UX53 244 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 Q6ZUG5 572 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 OTOP2Q7RTS6 562 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 CUL5Q93034 780 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 JAKMIP1Q96N16 626 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 SENP7Q9BQF6 1050 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 PBX4Q9BYU1 374 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 V9GY48 417 aaPredicted RBP15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 MYO9BQ13459 2157 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 TANC1Q9C0D5 1861 aa15.08■□□□□ 0
TNFRSF1A-215ENST00000543359 TMEM265A0A087WTH1 108 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 FIBPO43427 364 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 EPB41L2O43491 1005 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 ATP9AO75110 1047 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 ITGB5P18084 799 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 RPS6KB1P23443 525 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 DNAJB2P25686 324 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 HOXC8P31273 242 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 CHMP4BP1P59074 171 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 RBL2Q08999 1139 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 APOBRQ0VD83 1088 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 TRIM71Q2Q1W2 868 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 GNPTABQ3T906 1256 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 TRAF7Q6Q0C0 670 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 WNT8BQ93098 351 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 ALG1Q9BT22 464 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 KATNAL1Q9BW62 490 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 MLXIPQ9HAP2 919 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 NID2Q14112 1375 aa15.07■□□□□ 0
TNFRSF1A-215ENST00000543359 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 GOLGA8BA8MQT2 603 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 RBAK-RBAKDNI3L0D1 243 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 STXBP3O00186 592 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 KCNA2P16389 499 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 RFC2P35250 354 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 EVCP57679 992 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 BFSP2Q13515 415 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 NEDD9Q14511 834 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms