RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 USP17L15C9J2P7 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L13C9JLJ4 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L11C9JVI0 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L18D6R9N7 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L22D6RA61 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L17D6RBQ6 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L19D6RCP7 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L20D6RJB6 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 CYP3A7P24462 503 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L24Q0WX57 530 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 AP3B2Q13367 1082 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 USP17L6PQ6QN14 398 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 MOXD1Q6UVY6 613 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 HDXQ7Z353 690 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 COL23A1Q86Y22 540 aaPredicted RBP20.66■□□□□ 0.9
COPS7A-215ENST00000543155 C2CD5Q86YS7 1000 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 GLIS3Q8NEA6 775 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 RPGRIP1Q96KN7 1286 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 MBOAT7Q96N66 472 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 IDI2Q9BXS1 227 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 MMRN2Q9H8L6 949 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
COPS7A-215ENST00000543155 EPHB6O15197 1021 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 RAD21O60216 631 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
COPS7A-215ENST00000543155 CYP27A1Q02318 531 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 CCDC65Q8IXS2 484 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 SECISBP2LQ93073 1101 aaKnown RBP20.65■□□□□ 0.9
COPS7A-215ENST00000543155 TRIM34Q9BYJ4 488 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 EDEM3Q9BZQ6 932 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 ARHGAP20Q9P2F6 1191 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 COL4A3BPQ9Y5P4 624 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 LCA5LO95447 670 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 SSBP05455 408 aaKnown RBP eCLIP20.65■□□□□ 0.9
COPS7A-215ENST00000543155 VSNL1P62760 191 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 FKBP3Q00688 224 aaKnown RBP20.65■□□□□ 0.9
COPS7A-215ENST00000543155 TCP10Q12799 353 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 MCTP2Q6DN12 878 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 SLFN12Q8IYM2 578 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 MSL3Q8N5Y2 521 aaKnown RBP20.65■□□□□ 0.9
COPS7A-215ENST00000543155 ABCB6Q9NP58 842 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 KIAA1024Q9UPX6 916 aa20.65■□□□□ 0.9
COPS7A-215ENST00000543155 DDTLA6NHG4 134 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-215ENST00000543155 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 E9PMD0 336 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 ZNF263O14978 683 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 POLR3GO15318 223 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-215ENST00000543155 USO1O60763 962 aaKnown RBP20.64■□□□□ 0.89
COPS7A-215ENST00000543155 PLEKP08567 350 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-215ENST00000543155 PLA2G4BP0C869 781 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 CACNB3P54284 484 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 STRIP1Q5VSL9 837 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 WDR93Q6P2C0 686 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 KIAA0825Q8IV33 1275 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 CEP63Q96MT8 703 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 FAM198AQ9UFP1 575 aa20.64■□□□□ 0.89
COPS7A-215ENST00000543155 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
COPS7A-215ENST00000543155 HSPA1LP34931 641 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 KIF11P52732 1056 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 TATDN1Q6P1N9 297 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 NEK11Q8NG66 645 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 AKT1S1Q96B36 256 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 IFIH1Q9BYX4 1025 aaKnown RBP20.63■□□□□ 0.89
COPS7A-215ENST00000543155 KCNQ5Q9NR82 932 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 PCDHA13Q9Y5I0 950 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 POTEB3A0JP26 581 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 MACROD2A1Z1Q3 448 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 LRRC53A6NM62 1247 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 POTECB2RU33 542 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 RBM5P52756 815 aaKnown RBP eCLIP20.63■□□□□ 0.89
COPS7A-215ENST00000543155 ICA1Q05084 483 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 CCDC40Q4G0X9 1142 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 POTEBQ6S5H4 581 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 RRAGAQ7L523 313 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 GPBP1Q86WP2 473 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 BAP1Q92560 729 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 MMS19Q96T76 1030 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 DEF6Q9H4E7 631 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 PCDHAC2Q9Y5I4 1007 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 SCN9AQ15858 1988 aa20.63■□□□□ 0.89
COPS7A-215ENST00000543155 ATAD5Q96QE3 1844 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 TRAF5O00463 557 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 GNA14O95837 355 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 MMP10P09238 476 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 EIF4A3P38919 411 aaKnown RBP20.62■□□□□ 0.89
COPS7A-215ENST00000543155 USP14P54578 494 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 GPS2Q13227 327 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 SHROOM1Q2M3G4 852 aaPredicted RBP20.62■□□□□ 0.89
COPS7A-215ENST00000543155 DACT2Q5SW24 774 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 PDXDC1Q6P996 788 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 KRT26Q7Z3Y9 468 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 TRIM58Q8NG06 486 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 PCDHA2Q9Y5H9 948 aa20.62■□□□□ 0.89
COPS7A-215ENST00000543155 DUSP10Q9Y6W6 482 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms