RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ETV3LQ6ZN32 361 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 FRMD5Q7Z6J6 570 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 MILR1Q7Z6M3 343 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 NLRP10Q86W26 655 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 TMEM145Q8NBT3 493 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 RCBTB1Q8NDN9 531 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 CXorf38Q8TB03 319 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 SEC14L1Q92503 715 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 CHAMP1Q96JM3 812 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 TEPSINQ96N21 525 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 USP40Q9NVE5 1235 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 PCDHA2Q9Y5H9 948 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.57□□□□□ -1.2
XRCC4-206ENST00000542685 LCP1P13796 627 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 GRIA2P42262 883 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 GTF2A2P52657 109 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 ACBD5Q5T8D3 534 aaPredicted RBP7.56□□□□□ -1.2
XRCC4-206ENST00000542685 MROH9Q5TGP6 573 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 CD300LDQ6UXZ3 194 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 ANKS3Q6ZW76 656 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 CARFQ8N187 725 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 FAM26EQ8N5C1 309 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 CCNB3Q8WWL7 1395 aa7.56□□□□□ -1.2
XRCC4-206ENST00000542685 AGRPO00253 132 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 LTBRP36941 435 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 SLC6A11P48066 632 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 STK32CQ86UX6 486 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 RIOX2Q8IUF8 465 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 GORASP1Q9BQQ3 440 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 SPATA6Q9NWH7 488 aaPredicted RBP7.55□□□□□ -1.2
XRCC4-206ENST00000542685 NTMQ9P121 344 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 COA3Q9Y2R0 106 aaPredicted RBP7.55□□□□□ -1.2
XRCC4-206ENST00000542685 X6R8D5 127 aa7.55□□□□□ -1.2
XRCC4-206ENST00000542685 PRICKLE3O43900 615 aaPredicted RBP7.54□□□□□ -1.2
XRCC4-206ENST00000542685 SMARCA5O60264 1052 aaPredicted RBP7.54□□□□□ -1.2
XRCC4-206ENST00000542685 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
XRCC4-206ENST00000542685 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
XRCC4-206ENST00000542685 SKOR2Q2VWA4 1001 aaPredicted RBP7.54□□□□□ -1.2
XRCC4-206ENST00000542685 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
XRCC4-206ENST00000542685 EPN3Q9H201 632 aa7.54□□□□□ -1.2
XRCC4-206ENST00000542685 ARHGAP35Q9NRY4 1499 aa7.54□□□□□ -1.2
XRCC4-206ENST00000542685 A0A1W2PQU0 124 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 HSP90AA1P07900 732 aaKnown RBP7.53□□□□□ -1.2
XRCC4-206ENST00000542685 CELA3BP08861 270 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 STAT5AP42229 794 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 LSAMPQ13449 338 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 NPM2Q86SE8 214 aaKnown RBP7.53□□□□□ -1.2
XRCC4-206ENST00000542685 ZC3H18Q86VM9 953 aaKnown RBP7.53□□□□□ -1.2
XRCC4-206ENST00000542685 Q8N1Y9 231 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 YIPF4Q9BSR8 244 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 C11orf84Q9BUA3 381 aaPredicted RBP7.53□□□□□ -1.2
XRCC4-206ENST00000542685 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
XRCC4-206ENST00000542685 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
XRCC4-206ENST00000542685 RTP5Q14D33 572 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 TESK1Q15569 626 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 DDR2Q16832 855 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 UBXN11Q5T124 520 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 FERMT3Q86UX7 667 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 SLC43A3Q8NBI5 491 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
XRCC4-206ENST00000542685 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 BDH2Q9BUT1 245 aa7.52□□□□□ -1.21
XRCC4-206ENST00000542685 H7BY64 318 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 HGSO14964 777 aaPredicted RBP7.51□□□□□ -1.21
XRCC4-206ENST00000542685 NOBOXO60393 691 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 CAPNS1P04632 268 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 GJA9P57773 515 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 FAM126BQ8IXS8 530 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 KCTD13Q8WZ19 329 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 GMLQ99445 158 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 PCDH18Q9HCL0 1135 aa7.51□□□□□ -1.21
XRCC4-206ENST00000542685 AQRO60306 1485 aaKnown RBP eCLIP7.5□□□□□ -1.21
XRCC4-206ENST00000542685 KLF4O43474 513 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 THBS2P35442 1172 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 PLP2Q04941 152 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 CHRNA2Q15822 529 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
XRCC4-206ENST00000542685 ZNF761Q86XN6 746 aaPredicted RBP7.5□□□□□ -1.21
XRCC4-206ENST00000542685 KYQ8NBH2 561 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 EFCAB5A4FU69 1503 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 CUX1P39880 1505 aa7.5□□□□□ -1.21
XRCC4-206ENST00000542685 NCAPD3P42695 1498 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
XRCC4-206ENST00000542685 DGKIO75912 1065 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 ITGA1P56199 1179 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 MAP4K2Q12851 820 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 USP53Q70EK8 1073 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 TTLL6Q8N841 843 aa7.49□□□□□ -1.21
XRCC4-206ENST00000542685 ARRDC4Q8NCT1 418 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms