RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 EHMT1Q9H9B1 1298 aa10.62□□□□□ -0.71
DDX55-208ENST00000541259 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
DDX55-208ENST00000541259 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.62□□□□□ -0.71
DDX55-208ENST00000541259 CYP3A7-CYP3A51PA0A087WV96 503 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 FAM86B1E9PN63 330 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 SLC37A4O43826 429 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 FKTNO75072 461 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 CYP3A7P24462 503 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 CCND2P30279 289 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 ZNF76P36508 570 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 TRAPPC10P48553 1259 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 PTPAQ15257 358 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 CCL14Q16627 93 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 LHX8Q68G74 356 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 C4orf32Q8N8J7 132 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 GJA10Q969M2 543 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 MAML3Q96JK9 1138 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 IWS1Q96ST2 819 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 TMEM60Q9H2L4 133 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 FLRT1Q9NZU1 646 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
DDX55-208ENST00000541259 ATP6V1DQ9Y5K8 247 aa10.61□□□□□ -0.71
DDX55-208ENST00000541259 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 FIBPO43427 364 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 RGS20O76081 388 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 ARP10275 920 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 ITGB5P18084 799 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 EDNRBP24530 442 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 CIITAP33076 1130 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 NASPP49321 788 aaPredicted RBP10.6□□□□□ -0.71
DDX55-208ENST00000541259 KRT85P78386 507 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 PRKCZQ05513 592 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 PTGDRQ13258 359 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 KIF22Q14807 665 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 PRR16Q569H4 304 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 PPP4R3AQ6IN85 833 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 EEPD1Q7L9B9 569 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 LINC00301Q8NCQ3 95 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 LENG9Q96B70 501 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 MBOAT7Q96N66 472 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 POLR3EQ9NVU0 708 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 DDX25Q9UHL0 483 aaKnown RBP10.6□□□□□ -0.71
DDX55-208ENST00000541259 RCOR1Q9UKL0 485 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 UBIAD1Q9Y5Z9 338 aa10.6□□□□□ -0.71
DDX55-208ENST00000541259 ASB14A6NK59 587 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 MEIS1O00470 390 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 SNPHO15079 494 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 EVI5O60447 810 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 NEMFO60524 1076 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 SNAI1O95863 264 aaPredicted RBP10.59□□□□□ -0.71
DDX55-208ENST00000541259 HOXC6P09630 235 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
DDX55-208ENST00000541259 RGS2P41220 211 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 FLT3LGP49771 235 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 PDE4DQ08499 809 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 SEMA3FQ13275 785 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 SLC39A14Q15043 492 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 STK38Q15208 465 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 STXBP2Q15833 593 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 IL17AQ16552 155 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 Q4G0T1 1027 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 ATL3Q6DD88 541 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 MOXD1Q6UVY6 613 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 CLEC17AQ6ZS10 378 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 ARMCX2Q7L311 632 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 JMYQ8N9B5 988 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
DDX55-208ENST00000541259 HAS1Q92839 578 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 ERO1AQ96HE7 468 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 CFAP45Q9UL16 551 aa10.59□□□□□ -0.71
DDX55-208ENST00000541259 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
DDX55-208ENST00000541259 MYH9P35579 1960 aaKnown RBP10.58□□□□□ -0.72
DDX55-208ENST00000541259 SPTLC2O15270 562 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 MSH4O15457 936 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
DDX55-208ENST00000541259 IGHA2P01877 340 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 GCFC2P16383 781 aaKnown RBP10.58□□□□□ -0.72
DDX55-208ENST00000541259 ATP2C1P98194 919 aaPredicted RBP10.58□□□□□ -0.72
DDX55-208ENST00000541259 GRIN1Q05586 938 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 PRAMEF19Q5SWL8 479 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 XRRA1Q6P2D8 792 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 SEPT14Q6ZU15 432 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
DDX55-208ENST00000541259 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 SOCS4Q8WXH5 440 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 SPATA32Q96LK8 384 aa10.58□□□□□ -0.72
DDX55-208ENST00000541259 CLIC6Q96NY7 704 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms