RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 ANKRD20A8PQ5CZ79 823 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 KLHL7Q8IXQ5 586 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 P2RX5Q93086 422 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 FAM205AQ6ZU69 1335 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 HMGB1P1B2RPK0 211 aaPredicted RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 NMT2O60551 498 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 SKAP2O75563 359 aaPredicted RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 EMC10Q5UCC4 262 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CD302Q8IX05 232 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 ERGIC2Q96RQ1 377 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 TACO1Q9BSH4 297 aaKnown RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 TMBIM4Q9HC24 238 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 GMNCA6NCL1 334 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 RAD51CO43502 376 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 TM4SF1P30408 202 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 PDE4DQ08499 809 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 TROAPQ12815 778 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 BYSLQ13895 437 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 DDX42Q86XP3 938 aaKnown RBP eCLIP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 ESR2Q92731 530 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 CCNE1P24864 410 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 LONP1P36776 959 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 RCAN1P53805 252 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 CLNS1AP54105 237 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 HLTFQ14527 1009 aaKnown RBP eCLIP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 KCNB1Q14721 858 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 GLE1Q53GS7 698 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 CNOT8Q9UFF9 292 aaKnown RBP16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 JAG2Q9Y219 1238 aa16.37■□□□□ 0.21
AC005840.4-201ENST00000541242 A0A1W2PQJ5 194 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 PALMO75781 387 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 PTPROQ16827 1216 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 TMTC3Q6ZXV5 915 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 MREGQ8N565 214 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 TBC1D31Q96DN5 1066 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 SGSM3Q96HU1 749 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 SEC16BQ96JE7 1060 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 DCDC2CA8MYV0 355 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 HSD17B3P37058 310 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 SCTRP47872 440 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 MECOMQ03112 1051 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 ACCSLQ4AC99 568 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 NSUN4Q96CB9 384 aaKnown RBP16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 NOX5Q96PH1 765 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 LRRC4CQ9HCJ2 640 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
AC005840.4-201ENST00000541242 PHF20L1A8MW92 1017 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 RGL2O15211 777 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 LCA5LO95447 670 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 UBA7P41226 1012 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 ZSCAN29Q8IWY8 852 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 DHTKD1Q96HY7 919 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 SLC12A6Q9UHW9 1150 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 GOLGA6L10A6NI86 522 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 TRAPPC3O43617 180 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 PRDX5P30044 214 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 MRPL12P52815 198 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 SATB1Q01826 763 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 EHHADHQ08426 723 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 TDRD12Q587J7 1177 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 FIGNQ5HY92 759 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 KBTBD4Q9NVX7 518 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 GGA2Q9UJY4 613 aa16.35■□□□□ 0.21
AC005840.4-201ENST00000541242 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
AC005840.4-201ENST00000541242 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
AC005840.4-201ENST00000541242 SCG2P13521 617 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms