RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RETREG2Q8NC44 543 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CEP95Q96GE4 821 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CDK5RAP3Q96JB5 506 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 GPCPD1Q9NPB8 672 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 RAD21O60216 631 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CALCRLQ16602 461 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 SPRED3Q2MJR0 410 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CCDC40Q4G0X9 1142 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 DGKHQ86XP1 1220 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 FAM114A1Q8IWE2 563 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 LARP4BQ92615 738 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CALML4Q96GE6 196 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 ABCA3Q99758 1704 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 A0A087WUV0 522 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 SHTN1A0MZ66 631 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 ATP2C2O75185 946 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 SLC16A2P36021 539 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 FLT3P36888 993 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 IQCEQ6IPM2 695 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 CCDC47Q96A33 483 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 EYA3Q99504 573 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 TSGA10Q9BZW7 698 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 PPANQ9NQ55 473 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 BCCIPQ9P287 314 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 ANKIB1Q9P2G1 1089 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 KIAA1551Q9HCM1 1747 aa11.44□□□□□ -0.58
CDC42SE1-207ENST00000540998 LOC102724159A0A0B4J2E5 919 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 E9PMD0 336 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 INPP5BP32019 993 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 PWP2Q15269 919 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 KIAA0753Q2KHM9 967 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 FAM83BQ5T0W9 1011 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 CFAP58Q5T655 872 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 RNF187Q5TA31 235 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 REXO1Q8N1G1 1221 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 NEUROG2Q9H2A3 272 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 SCN7AQ01118 1682 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 DCDC2CA8MYV0 355 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 TCP1P17987 556 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 TMOD1P28289 359 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 DDB1Q16531 1140 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 ZNF662Q6ZS27 426 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 ADAT2Q7Z6V5 191 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
CDC42SE1-207ENST00000540998 LSP1P33241 339 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 COPB2P35606 906 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 STAT3P40763 770 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 SBK1Q52WX2 424 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 GOLGA8KD6RF30 607 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 KCNK3O14649 394 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 PCP11498 1178 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 HNRNPH3P31942 346 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 CDK8P49336 464 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 MNAT1P51948 309 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 TTBK2Q6IQ55 1244 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 TRIM31Q9BZY9 425 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 BCS1LQ9Y276 419 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 GRID2IPA4D2P6 1211 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 ITGA4P13612 1032 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 CASP5P51878 434 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 COASYQ13057 564 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 PICALMQ13492 652 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 CFAP221Q4G0U5 840 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 UNC13DQ70J99 1090 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 C6orf50Q9HD87 102 aa11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-207ENST00000540998 OPA1O60313 960 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 PRPHP41219 470 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 IFT88Q13099 833 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 EMBQ6PCB8 327 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 IQCKQ8N0W5 287 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 CD248Q9HCU0 757 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 AJAP1Q9UKB5 411 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 E7EVH7 732 aa11.41□□□□□ -0.58
CDC42SE1-207ENST00000540998 F8W031 263 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms