RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MARCH6O60337 910 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 CETPP11597 493 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 HERVK_113P62684 666 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 SLC30A10Q6XR72 485 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 CABP7Q86V35 215 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 FAM20AQ96MK3 541 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 SLC45A1Q9Y2W3 748 aa16.05■□□□□ 0.16
CYB561A3-216ENST00000540755 POTEFA5A3E0 1075 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 CAVIN2O95810 425 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 CDC25AP30304 524 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 PLS1Q14651 629 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 POSTNQ15063 836 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 ZFYVE28Q9HCC9 887 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 PCDHA12Q9UN75 941 aa16.04■□□□□ 0.16
CYB561A3-216ENST00000540755 SLC26A4O43511 780 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PNOCQ13519 176 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 STX1AQ16623 288 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CEP55Q53EZ4 464 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 RRAGBQ5VZM2 374 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PCNX4Q63HM2 1172 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 NIPA1Q7RTP0 329 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 ADGRA2Q96PE1 1338 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 MEIS1O00470 390 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 MSH4O15457 936 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 TLR2O60603 784 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CNMDO75829 334 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 BCRP11274 1271 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 COPB2P35606 906 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 STAT6P42226 847 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 UBXN2AP68543 259 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 BAATQ14032 418 aaPredicted RBP16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PRPF38BQ5VTL8 546 aaKnown RBP16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CYP2W1Q8TAV3 490 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PAGE5Q96GU1 130 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 PXMP2Q9NR77 195 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 ANO10Q9NW15 660 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 CYP39A1Q9NYL5 469 aa16.03■□□□□ 0.16
CYB561A3-216ENST00000540755 POTEMA6NI47 508 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 SLC25A27O95847 323 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 PGM5Q15124 567 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 NAALADL2Q58DX5 795 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 SPATA20Q8TB22 786 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 RMDN3Q96TC7 470 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 UBIAD1Q9Y5Z9 338 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 STK24Q9Y6E0 443 aa16.02■□□□□ 0.15
CYB561A3-216ENST00000540755 PFASO15067 1338 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 NLRP12P59046 1061 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 SPIRE1Q08AE8 756 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 ANO6Q4KMQ2 910 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 HYIQ5T013 277 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 ANKRD23Q86SG2 305 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 IL31RAQ8NI17 732 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 SNX29Q8TEQ0 813 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 SLC5A5Q92911 643 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 GJA10Q969M2 543 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
CYB561A3-216ENST00000540755 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
CYB561A3-216ENST00000540755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
CYB561A3-216ENST00000540755 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms