RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 GRXCR2A6NFK2 248 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 PPP1R11O60927 126 aaPredicted RBP8.54□□□□□ -1.04
YBX3-209ENST00000540747 LINC00271P0C7V0 271 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 IL9P15248 144 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
YBX3-209ENST00000540747 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 IKBKEQ14164 716 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 SLC35G1Q2M3R5 365 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 ASPRV1Q53RT3 343 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 PLEKHG4Q58EX7 1191 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 STOX1Q6ZVD7 989 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 CHST3Q7LGC8 479 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 GJD3Q8N144 294 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 C7orf31Q8N865 590 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 ENAHQ8N8S7 591 aaPredicted RBP8.54□□□□□ -1.04
YBX3-209ENST00000540747 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 ESR2Q92731 530 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 MRPL38Q96DV4 380 aaKnown RBP8.54□□□□□ -1.04
YBX3-209ENST00000540747 PDCD2LQ9BRP1 358 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 C16orf70Q9BSU1 422 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 KATNAL1Q9BW62 490 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 OSBPL7Q9BZF2 842 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
YBX3-209ENST00000540747 MTUS1Q9ULD2 1270 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
YBX3-209ENST00000540747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.53□□□□□ -1.04
YBX3-209ENST00000540747 POTEB3A0JP26 581 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 PPFIA4O75335 1185 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
YBX3-209ENST00000540747 KCNA5P22460 613 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 CHMP4BP1P59074 171 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 SP2Q02086 613 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
YBX3-209ENST00000540747 HSDL1Q3SXM5 330 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 CELF3Q5SZQ8 465 aaKnown RBP8.53□□□□□ -1.04
YBX3-209ENST00000540747 POTEBQ6S5H4 581 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 VSIG10LQ86VR7 867 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 FBXO11Q86XK2 927 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 FBXO22Q8NEZ5 403 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 DBF4BQ8NFT6 615 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
YBX3-209ENST00000540747 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 FRMPD4Q14CM0 1322 aa8.53□□□□□ -1.04
YBX3-209ENST00000540747 H3BNC9 293 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 CAND2O75155 1236 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 KDM4AO75164 1064 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 ADAM17P78536 824 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 ZP2Q05996 745 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 PUS10Q3MIT2 529 aaKnown RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 EPC2Q52LR7 807 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 ARHGEF16Q5VV41 709 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 DHX37Q8IY37 1157 aaKnown RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 GPKOWQ92917 476 aaPredicted RBP eCLIP8.52□□□□□ -1.05
YBX3-209ENST00000540747 TOP1MTQ969P6 601 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 SAMD11Q96NU1 681 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
YBX3-209ENST00000540747 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 MAP3K20Q9NYL2 800 aaKnown RBP8.52□□□□□ -1.05
YBX3-209ENST00000540747 ZDBF2Q9HCK1 2354 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 TECTAO75443 2155 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 ATG2AQ2TAZ0 1938 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 RSPH10B2B2RC85 870 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 B4E1Z4 1266 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 C5orf67F2Z3F1 127 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 GGPS1O95749 300 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 CFBP00751 764 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 AMHP03971 560 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 PARP1P09874 1014 aaKnown RBP8.51□□□□□ -1.05
YBX3-209ENST00000540747 RSPH10BP0C881 870 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SMIM10L2AP0DMW4 78 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SMIM10L2BP0DMW5 78 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 TGFB3P10600 412 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SDSP20132 328 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 LTBRP36941 435 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 PGM5Q15124 567 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SEC23AQ15436 765 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 TCEAL5Q5H9L2 206 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 KCNV1Q6PIU1 500 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 MYOCDQ8IZQ8 938 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 STAG2Q8N3U4 1231 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 SAMD3Q8N6K7 520 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms