RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 PDLIM7Q9NR12 457 aa15.34■□□□□ 0.05
CCDC130-202ENST00000540216 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 TLR3O15455 904 aaKnown RBP15.33■□□□□ 0.04
CCDC130-202ENST00000540216 UBA1P22314 1058 aaKnown RBP15.33■□□□□ 0.04
CCDC130-202ENST00000540216 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
CCDC130-202ENST00000540216 NEDD9Q14511 834 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 DGKDQ16760 1214 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 CELF3Q5SZQ8 465 aaKnown RBP15.33■□□□□ 0.04
CCDC130-202ENST00000540216 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 GDF15Q99988 308 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 ANO3Q9BYT9 981 aa15.33■□□□□ 0.04
CCDC130-202ENST00000540216 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
CCDC130-202ENST00000540216 KIAA0355O15063 1070 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 MAFGO15525 162 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 GGPS1O95749 300 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 HOXD8P13378 290 aaPredicted RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 BMP8BP34820 402 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 SREBF1P36956 1147 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 RBM25P49756 843 aaKnown RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 SCRN1Q12765 414 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 REXO1Q8N1G1 1221 aaKnown RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 GIMAP8Q8ND71 665 aaPredicted RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 LBHD1Q9BQE6 289 aaPredicted RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 PRO3102Q9H379 93 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 MLXIPQ9HAP2 919 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 PRDM5Q9NQX1 630 aaPredicted RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
CCDC130-202ENST00000540216 UBIAD1Q9Y5Z9 338 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 SCN10AQ9Y5Y9 1956 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
CCDC130-202ENST00000540216 A0A1W2PPC1 479 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 PPFIA4O75335 1185 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 MAGEA10P43363 369 aaPredicted RBP15.31■□□□□ 0.04
CCDC130-202ENST00000540216 SP2Q02086 613 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 FAAP100Q0VG06 881 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 SEMA3FQ13275 785 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 MTMR1Q13613 665 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 FAM126BQ8IXS8 530 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
CCDC130-202ENST00000540216 KATNAL1Q9BW62 490 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 JADE2Q9NQC1 790 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 DNAH12Q6ZR08 3092 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 LTBP2Q14767 1821 aa15.31■□□□□ 0.04
CCDC130-202ENST00000540216 ITGB5P18084 799 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 PSMC6P62333 389 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 PTPN11Q06124 597 aaPredicted RBP15.3■□□□□ 0.04
CCDC130-202ENST00000540216 GALNT17Q6IS24 598 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
CCDC130-202ENST00000540216 MYH7BA7E2Y1 1941 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
CCDC130-202ENST00000540216 PPFIA3O75145 1194 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 F2P00734 622 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 CD4P01730 458 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 SUPT20HL2P0C7V6 817 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 XBP1P17861 261 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 ARHGAP4P98171 946 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 ME3Q16798 604 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 HSDL1Q3SXM5 330 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 CEP55Q53EZ4 464 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 NIPA1Q7RTP0 329 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 SH3RF1Q7Z6J0 888 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 WASF1Q92558 559 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
CCDC130-202ENST00000540216 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 TBX21Q9UL17 535 aa15.29■□□□□ 0.04
CCDC130-202ENST00000540216 CYP3A4P08684 503 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 RAG1P15918 1043 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 KCNA2P16389 499 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 NLRP5P59047 1200 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 MDM2Q00987 491 aaPredicted RBP15.28■□□□□ 0.04
CCDC130-202ENST00000540216 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 HABP4Q5JVS0 413 aaKnown RBP15.28■□□□□ 0.04
CCDC130-202ENST00000540216 CYFIP1Q7L576 1253 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 SESTD1Q86VW0 696 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 DAGLBQ8NCG7 672 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 KIF2CQ99661 725 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
CCDC130-202ENST00000540216 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 LIMCH1Q9UPQ0 1083 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 TRIOBPQ9H2D6 2365 aa15.28■□□□□ 0.04
CCDC130-202ENST00000540216 B4GALT4O60513 344 aa15.27■□□□□ 0.04
CCDC130-202ENST00000540216 CTDNEP1O95476 244 aa15.27■□□□□ 0.04
CCDC130-202ENST00000540216 RABEP1Q15276 862 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms