RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PIP4K2AP48426 406 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 NCALDP61601 193 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 USP46P62068 366 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PPP2R2AP63151 447 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 SPAG1Q07617 926 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PPIDQ08752 370 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 BNIP1Q12981 228 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 TWISTNBQ3B726 338 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 LONRF3Q496Y0 759 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 ERMARDQ5T6L9 678 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC174Q6PII3 467 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 RAD9BQ6WBX8 426 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 CPLX4Q7Z7G2 160 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 FERMT3Q86UX7 667 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 LSMEM2Q8N112 164 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 AGGF1Q8N302 714 aaeCLIP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 RNF10Q8N5U6 811 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 GDAP1Q8TB36 358 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 INPP5DQ92835 1189 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 GATA6Q92908 595 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 ATP6V0A1Q93050 837 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 EFHD2Q96C19 240 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 VPS50Q96JG6 964 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 C8orf76Q96K31 380 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PBKQ96KB5 322 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 UIMC1Q96RL1 719 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 FAM129AQ9BZQ8 928 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 FTOQ9C0B1 505 aaKnown RBP eCLIP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 OCEL1Q9H607 264 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 SYNCQ9H7C4 482 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 LZTFL1Q9NQ48 299 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PANK4Q9NVE7 773 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 FAIMQ9NVQ4 179 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 SAMD15Q9P1V8 674 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 ITM2BQ9Y287 266 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 BOLA1Q9Y3E2 137 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 NUMBLQ9Y6R0 609 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PDS5AQ29RF7 1337 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 AGLP35573 1532 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 GRID2IPA4D2P6 1211 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 IQCA1LA6NCM1 817 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 C2orf72A6NCS6 295 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 SPDYE16A6NNV3 312 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CETN3O15182 167 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 IDH3BO43837 385 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 STAM2O75886 525 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 GLRX3O76003 335 aaKnown RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 GNAI2P04899 355 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 HNRNPCP07910 306 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 VHLP40337 213 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 ME1P48163 572 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 PDE6CP51160 858 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 ALDH5A1P51649 535 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 COPS2P61201 443 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 PLCB3Q01970 1234 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 NSUN2Q08J23 767 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CUL1Q13616 776 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CYLC2Q14093 348 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DIXDC1Q155Q3 683 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 IMMTQ16891 758 aaKnown RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 SPRED3Q2MJR0 410 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 BLOC1S2Q6QNY1 142 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 NLRP9Q7RTR0 991 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 NANOGNBQ7Z5D8 188 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 FBXL16Q8N461 479 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 LINC00301Q8NCQ3 95 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DPF2Q92785 391 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 MAP4K1Q92918 833 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 BRF1Q92994 677 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 HAUS1Q96CS2 278 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 TRIM11Q96F44 468 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 ZNF317Q96PQ6 595 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 RPS6KC1Q96S38 1066 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 MMS19Q96T76 1030 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 SEC62Q99442 399 aaKnown RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DCLRE1BQ9H816 532 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CLK4Q9HAZ1 481 aaKnown RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 PIDD1Q9HB75 910 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 TXLNGQ9NUQ3 528 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 NLRP2Q9NX02 1062 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DDX43Q9NXZ2 648 aaKnown RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 CYP39A1Q9NYL5 469 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DLGAP2Q9P1A6 1054 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 SLAIN2Q9P270 581 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 PPP1R1BQ9UD71 204 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-211ENST00000539921 ZNHIT2Q9UHR6 403 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 DSEQ9UL01 958 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 HPSEQ9Y251 543 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 SALL1Q9NSC2 1324 aa6.7□□□□□ -1.34
SNHG1-211ENST00000539921 NCAPD2Q15021 1401 aa6.69□□□□□ -1.34
SNHG1-211ENST00000539921 TET3O43151 1660 aa6.69□□□□□ -1.34
SNHG1-211ENST00000539921 BCL9LQ86UU0 1499 aa6.69□□□□□ -1.34
SNHG1-211ENST00000539921 A0A0J9YVX5 310 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms