RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 GPC2Q8N158 579 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 CSGALNACT2Q8N6G5 542 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 ZNF526Q8TF50 670 aaPredicted RBP11.34□□□□□ -0.59
SPARC-209ENST00000539687 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 MED15Q96RN5 788 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 PLIN2Q99541 437 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 POLR3CQ9BUI4 534 aaPredicted RBP11.34□□□□□ -0.59
SPARC-209ENST00000539687 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 DNM3Q9UQ16 869 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 DYNC1I1O14576 645 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 ZBED4O75132 1171 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 GNA14O95837 355 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 CFBP00751 764 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
SPARC-209ENST00000539687 PLA2G4BP0C869 781 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 PBX1P40424 430 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 HSD17B4P51659 736 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 OAZ1P54368 228 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 MCM6Q14566 821 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 SUPT20HL1Q3ZLR7 823 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 CENPPQ6IPU0 288 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 APTXQ7Z2E3 356 aaKnown RBP11.33□□□□□ -0.6
SPARC-209ENST00000539687 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 DDX12PQ92771 950 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 INTS13Q9NVM9 706 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 KCND2Q9NZV8 630 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 ZNF112Q9UJU3 913 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 CCPG1Q9ULG6 757 aa11.33□□□□□ -0.6
SPARC-209ENST00000539687 MYMKA6NI61 221 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 BCRP11274 1271 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 LMNB1P20700 586 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 GTF2F1P35269 517 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPARC-209ENST00000539687 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
SPARC-209ENST00000539687 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 NCAPH2Q6IBW4 605 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 XRRA1Q6P2D8 792 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 LENG9Q96B70 501 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 RIT2Q99578 217 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 SRRTQ9BXP5 876 aaKnown RBP11.32□□□□□ -0.6
SPARC-209ENST00000539687 PANK4Q9NVE7 773 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 KIAA1024Q9UPX6 916 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 MYH7BA7E2Y1 1941 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
SPARC-209ENST00000539687 UQCRHLA0A096LP55 91 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 OPLAHO14841 1288 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 MSH4O15457 936 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 MFAP3LO75121 409 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 UQCRHP07919 91 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 IDEP14735 1019 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 GAP43P17677 238 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 UBXN1Q04323 297 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 EHHADHQ08426 723 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 STK4Q13043 487 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 PPP2R5CQ13362 524 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 ARID5BQ14865 1188 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
SPARC-209ENST00000539687 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
SPARC-209ENST00000539687 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 C17orf53Q8N3J3 647 aaPredicted RBP11.31□□□□□ -0.6
SPARC-209ENST00000539687 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
SPARC-209ENST00000539687 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 SLC5A5Q92911 643 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 C16orf45Q96MC5 204 aaPredicted RBP11.31□□□□□ -0.6
SPARC-209ENST00000539687 CEP63Q96MT8 703 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 TEKT3Q9BXF9 490 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 TCEAL9Q9UHQ7 104 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 VAV3Q9UKW4 847 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 DOCK1Q14185 1865 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
SPARC-209ENST00000539687 IGLV3-22A0A075B6J6 115 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 GAS7O60861 476 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 EYA4O95677 639 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 CCDC175P0C221 793 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FECHP22830 423 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms