RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 USP17L19D6RCP7 530 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 USP17L20D6RJB6 530 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 PRDM1O75626 825 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 POLR3DP05423 398 aaPredicted RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 PROS1P07225 676 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 C6orf222P0C671 652 aaPredicted RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 ERCC3P19447 782 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 SLC4A3P48751 1232 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 AK2P54819 239 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 ANTXR2P58335 489 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 WDR5P61964 334 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 USP17L24Q0WX57 530 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 SHROOM1Q2M3G4 852 aaPredicted RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 MFSD6Q6ZSS7 791 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 NOL8Q76FK4 1167 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 CYB5R4Q7L1T6 521 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 RALYLQ86SE5 291 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 MB21D2Q8IYB1 491 aaPredicted RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 SNX21Q969T3 373 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 DYNLL2Q96FJ2 89 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 HNRNPABQ99729 332 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 RTKNQ9BST9 563 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 LRRC2Q9BYS8 371 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 PDRG1Q9NUG6 133 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 CD207Q9UJ71 328 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 ANGPTL2Q9UKU9 493 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 CDV3Q9UKY7 258 aaKnown RBP6.3□□□□□ -1.4
CELF1-220ENST00000539455 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 LHX6Q9UPM6 363 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
CELF1-220ENST00000539455 MYH8P13535 1937 aa6.3□□□□□ -1.4
CELF1-220ENST00000539455 CEP295Q9C0D2 2601 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 NBEAQ8NFP9 2946 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 GRIN2DO15399 1336 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 TAF4O00268 1085 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 ADCY6O43306 1168 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 NCK2O43639 380 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 PRC1O43663 620 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 DUSP11O75319 330 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 EYA4O95677 639 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 HMGB1P09429 215 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 FGRP09769 529 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 DEFB103AP81534 67 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 HYAL1Q12794 435 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 TRDNQ13061 729 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 TOB2Q14106 344 aaPredicted RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 PPM1JQ5JR12 505 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 CATSPERGQ6ZRH7 1159 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 Q6ZUG5 572 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 DHX32Q7L7V1 743 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 ABRAQ8N0Z2 381 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 ZDHHC16Q969W1 377 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 RAD9AQ99638 391 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 TINF2Q9BSI4 451 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 FTOQ9C0B1 505 aaKnown RBP eCLIP6.29□□□□□ -1.4
CELF1-220ENST00000539455 UPF3AQ9H1J1 476 aaKnown RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 RNF41Q9H4P4 317 aaPredicted RBP6.29□□□□□ -1.4
CELF1-220ENST00000539455 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
CELF1-220ENST00000539455 K7ELQ4 463 aaPredicted RBP6.28□□□□□ -1.4
CELF1-220ENST00000539455 SH2B2O14492 632 aaPredicted RBP6.28□□□□□ -1.4
CELF1-220ENST00000539455 CTAGE5O15320 804 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 LINC01565O15544 149 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 MAP3K7O43318 606 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 ORC4O43929 436 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 RANBP6O60518 1105 aaKnown RBP6.28□□□□□ -1.4
CELF1-220ENST00000539455 ZMYND10O75800 440 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 BAIAP3O94812 1187 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 GJB5O95377 273 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 LARGE1O95461 756 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 SLC3A2P08195 630 aaKnown RBP6.28□□□□□ -1.4
CELF1-220ENST00000539455 ASNSP08243 561 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 CYP2C9P11712 490 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 MCM5P33992 734 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 GTF2F1P35269 517 aaKnown RBP eCLIP6.28□□□□□ -1.4
CELF1-220ENST00000539455 KCNJ6P48051 423 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 CDK8P49336 464 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 GJA9P57773 515 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 RING1Q06587 406 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 PDE4BQ07343 736 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 ITGA7Q13683 1181 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 BECN1Q14457 450 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 ZYXQ15942 572 aaKnown RBP6.28□□□□□ -1.4
CELF1-220ENST00000539455 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 PPP4R3BQ5MIZ7 849 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 PRR23BQ6ZRT6 265 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 CCDC105Q8IYK2 499 aa6.28□□□□□ -1.4
CELF1-220ENST00000539455 BRF1Q92994 677 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms