RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 HMGB1P1B2RPK0 211 aaPredicted RBP13.15□□□□□ -0.3
NEK6-212ENST00000539416 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
NEK6-212ENST00000539416 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
NEK6-212ENST00000539416 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
NEK6-212ENST00000539416 GUCY2DQ02846 1103 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 SNX1Q13596 522 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 ZNF507Q8TCN5 953 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 CUL5Q93034 780 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 GDF3Q9NR23 364 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
NEK6-212ENST00000539416 DOCK2Q92608 1830 aa13.15□□□□□ -0.31
NEK6-212ENST00000539416 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 SRRM3A6NNA2 597 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 TRAPPC3O43617 180 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 ICA1Q05084 483 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 CCT6BQ92526 530 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 LGALS16A8MUM7 142 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 WNT7AO00755 349 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 GPAA1O43292 621 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEK6-212ENST00000539416 IFT20Q8IY31 132 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 OR2W6PQ8NHA6 318 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 SAAL1Q96ER3 474 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 MTRQ99707 1265 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
NEK6-212ENST00000539416 TMBIM4Q9HC24 238 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 SLC12A6Q9UHW9 1150 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
NEK6-212ENST00000539416 TACC1O75410 805 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 ANP32DO95626 131 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PPP1R7Q15435 360 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 CACNA2D3Q8IZS8 1091 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 CASKIN2Q8WXE0 1202 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
NEK6-212ENST00000539416 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 BATF3Q9NR55 127 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 CNOT8Q9UFF9 292 aaKnown RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 IL1R1P14778 569 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PRLRP16471 622 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PRCPP42785 496 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■■□ 23.2
NEK6-212ENST00000539416 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
NEK6-212ENST00000539416 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 MREGQ8N565 214 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 EYA3Q99504 573 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 TTYH3Q9C0H2 523 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 C15orf41Q9Y2V0 281 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
NEK6-212ENST00000539416 MYH7P12883 1935 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
NEK6-212ENST00000539416 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 PAK2Q13177 524 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 THEMIS2Q5TEJ8 643 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
NEK6-212ENST00000539416 MIS18BP1Q6P0N0 1132 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 RAPGEF5Q92565 580 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 EEF2KMTQ96G04 330 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 SALL4Q9UJQ4 1053 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 A0A1W2PQC6 194 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 B4DLN1 442 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 SNUPNO95149 360 aaKnown RBP13.12□□□□□ -0.31
NEK6-212ENST00000539416 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
NEK6-212ENST00000539416 PAFAH1B1P43034 410 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 BORCS6Q96GS4 357 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms