RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 GDF9O60383 454 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 NMT2O60551 498 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 SNAP25P60880 206 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 PSMC6P62333 389 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 MRPS5P82675 430 aaKnown RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 PWP2Q15269 919 aaKnown RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 BPHLQ86WA6 291 aaPredicted RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 DCAF4Q8WV16 495 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 IRX2Q9BZI1 471 aaPredicted RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 WNT8AQ9H1J5 351 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 ALDH8A1Q9H2A2 487 aaPredicted RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 NKX2-4Q9H2Z4 354 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 PRM3Q9NNZ6 103 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
MRE11-208ENST00000538923 ANAPC4Q9UJX5 808 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
MRE11-208ENST00000538923 RANBP6O60518 1105 aaKnown RBP10.48□□□□□ -0.73
MRE11-208ENST00000538923 PFKMP08237 780 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 MX1P20591 662 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 NOVP48745 357 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 CPT1AP50416 773 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 ADGRE1Q14246 886 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 CCDC85BQ15834 202 aaPredicted RBP10.48□□□□□ -0.73
MRE11-208ENST00000538923 DUSP28Q4G0W2 176 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 PDXDC2PQ6P474 469 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 MRGPRX2Q96LB1 330 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 RANBP17Q9H2T7 1088 aaKnown RBP10.48□□□□□ -0.73
MRE11-208ENST00000538923 PNMA2Q9UL42 364 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 YBX2Q9Y2T7 364 aaKnown RBP10.48□□□□□ -0.73
MRE11-208ENST00000538923 PCDHA11Q9Y5I1 949 aa10.48□□□□□ -0.73
MRE11-208ENST00000538923 DDX49Q9Y6V7 483 aaKnown RBP10.48□□□□□ -0.73
MRE11-208ENST00000538923 ZBBXA8MT70 800 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 FOXP2O15409 715 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 ORC4O43929 436 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 GFRA3O60609 400 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 ATP2A2P16615 1042 aaKnown RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 PTGS1P23219 599 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 ALDH5A1P51649 535 aaPredicted RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 PRR20EP86478 221 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PRR20CP86479 221 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PRR20DP86480 221 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PRR20BP86481 221 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PRR20AP86496 221 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PURAQ00577 322 aaKnown RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 BRDTQ58F21 947 aaPredicted RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 BTNL9Q6UXG8 535 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 SCLYQ96I15 445 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 MPHOSPH6Q99547 160 aaKnown RBP10.47□□□□□ -0.73
MRE11-208ENST00000538923 WDR11Q9BZH6 1224 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 RAD50Q92878 1312 aa10.47□□□□□ -0.73
MRE11-208ENST00000538923 MYH7P12883 1935 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 NFIBO00712 420 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 FGRP09769 529 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 ACTN1P12814 892 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 VARSP26640 1264 aaKnown RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 RFC2P35250 354 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 SLC16A2P36021 539 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 RABGGTBP53611 331 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 ALX1Q15699 326 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 SYDE2Q5VT97 1194 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 RASGRP2Q7LDG7 609 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 CYP4X1Q8N118 509 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 OR6J1Q8NGC5 347 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 OTUD7AQ8TE49 926 aaPredicted RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 EVI5LQ96CN4 794 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 UHRF1Q96T88 793 aaPredicted RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 MTG1Q9BT17 334 aaPredicted RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 TOMM22Q9NS69 142 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 TRMT13Q9NUP7 481 aaKnown RBP10.46□□□□□ -0.73
MRE11-208ENST00000538923 TNKSO95271 1327 aa10.46□□□□□ -0.73
MRE11-208ENST00000538923 MUC3AQ02505 3323 aa10.46□□□□□ -0.74
MRE11-208ENST00000538923 FRMPD2Q68DX3 1309 aaPredicted RBP10.45□□□□□ -0.74
MRE11-208ENST00000538923 B4DLN1 442 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 NKRFO15226 690 aaKnown RBP eCLIP10.45□□□□□ -0.74
MRE11-208ENST00000538923 KPNA6O60684 536 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 MYL3P08590 195 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 CYP2C9P11712 490 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 MRPL12P52815 198 aaKnown RBP10.45□□□□□ -0.74
MRE11-208ENST00000538923 PTK2Q05397 1052 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 AAK1Q2M2I8 961 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 TMEM67Q5HYA8 995 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 TTBK2Q6IQ55 1244 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 NFRKBQ6P4R8 1299 aa10.45□□□□□ -0.74
MRE11-208ENST00000538923 SLC30A10Q6XR72 485 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms