RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 A0A087WZG4 1122 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 SORBS3O60504 671 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 ACO1P21399 889 aaKnown RBP3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 FPR2P25090 351 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 RGS19P49795 217 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 AMPD2Q01433 879 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 LRCH2Q5VUJ6 765 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 ADAT2Q7Z6V5 191 aaKnown RBP3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 FUKQ8N0W3 1084 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 RNF34Q969K3 372 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 SEC61A2Q9H9S3 476 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 MRS2Q9HD23 443 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 WHRNQ9P202 907 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 ADAM29Q9UKF5 820 aa3.45□□□□□ -1.86
CBX3P4-201ENST00000538909 BICRAQ9NZM4 1560 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 TRBV23OR9-2A0A075B6M9 112 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 PLS3P13797 630 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 KRTAP10-9P60411 292 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 UNC5AQ6ZN44 842 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 RUFY4Q6ZNE9 571 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 ZNF627Q7L945 461 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 IL17DQ8TAD2 202 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 CACTINQ8WUQ7 758 aaKnown RBP3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 EDAQ92838 391 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 TOE1Q96GM8 510 aaKnown RBP3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 FGD4Q96M96 766 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 TMEM209Q96SK2 561 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 HAUS7Q99871 368 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 RBPJLQ9UBG7 517 aa3.44□□□□□ -1.86
CBX3P4-201ENST00000538909 U2SURPO15042 1029 aaKnown RBP3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 BMP5P22003 454 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 SLC6A11P48066 632 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 TUBA3CQ13748 450 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 FNDC7Q5VTL7 733 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 FBXW10Q5XX13 1052 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 TUBA3EQ6PEY2 450 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 TEPPQ6URK8 271 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 GLCCI1Q86VQ1 547 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 IFNL2Q8IZJ0 200 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 ARRDC4Q8NCT1 418 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 ZNF483Q8TF39 744 aaPredicted RBP3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 WRNIP1Q96S55 665 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 GBP3Q9H0R5 595 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 GPRC5CQ9NQ84 441 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 DTLQ9NZJ0 730 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 CGGBP1Q9UFW8 167 aaPredicted RBP3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 ZNF214Q9UL59 606 aaPredicted RBP3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 WASF3Q9UPY6 502 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 REXO2Q9Y3B8 237 aaKnown RBP3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 SLC4A7Q9Y6M7 1214 aa3.43□□□□□ -1.86
CBX3P4-201ENST00000538909 SUPT5HO00267 1087 aaKnown RBP3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 RAMP2O60895 175 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 COL6A1P12109 1028 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 INF2Q27J81 1249 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 HEATR6Q6AI08 1181 aaKnown RBP3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 Q6ZSN1 163 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 Q6ZUG5 572 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 SLITRK4Q8IW52 837 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 CLIP3Q96DZ5 547 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 NEIL1Q96FI4 390 aaPredicted RBP3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 FERD3LQ96RJ6 166 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 TM9SF2Q99805 663 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 GGT7Q9UJ14 662 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 ZNRF3Q9ULT6 936 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 PTPN22Q9Y2R2 807 aa3.42□□□□□ -1.86
CBX3P4-201ENST00000538909 PPM1BO75688 479 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 KLHL18O94889 574 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 LRG1P02750 347 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 EPHX1P07099 455 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 MAKP20794 623 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 CSF2RBP32927 897 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 MRPS21P82921 87 aaKnown RBP3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 FSTL1Q12841 308 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 CCDC142Q17RM4 750 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 MROH9Q5TGP6 573 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 PCSK4Q6UW60 755 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 CEP68Q76N32 757 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 TAB3Q8N5C8 712 aaPredicted RBP3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 TRMT2BQ96GJ1 504 aaKnown RBP3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 TTPALQ9BTX7 342 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 KLHL25Q9H0H3 589 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 SUGT1Q9Y2Z0 365 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 PCDHB4Q9Y5E5 795 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 SHROOM4Q9ULL8 1493 aa3.41□□□□□ -1.86
CBX3P4-201ENST00000538909 TCRBV5S2A0A599 114 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 RAD17O75943 681 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 GUCY2CP25092 1073 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 TAGLNQ01995 201 aaKnown RBP3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 SCRN1Q12765 414 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 GNPTABQ3T906 1256 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 FAM89AQ96GI7 184 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 OR14A2Q96R54 314 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 MMP19Q99542 508 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 PCDHB10Q9UN67 800 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 TIMELESSQ9UNS1 1208 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 ZNF652Q9Y2D9 606 aa3.4□□□□□ -1.87
CBX3P4-201ENST00000538909 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 HGSO14964 777 aaPredicted RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 KCNH1O95259 989 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ZNF888P0CJ79 500 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms