RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 F8VZ95 297 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 SART1O43290 800 aaKnown RBP13.58□□□□□ -0.24
USP3-203ENST00000538686 SNX3O60493 162 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 HLTFQ14527 1009 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP3-203ENST00000538686 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 GALNT17Q6IS24 598 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 AGGF1Q8N302 714 aaeCLIP13.58□□□□□ -0.24
USP3-203ENST00000538686 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 MAML3Q96JK9 1138 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 FAM81BQ96LP2 452 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 BRD8Q9H0E9 1235 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
USP3-203ENST00000538686 TXLNGQ9NUQ3 528 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 IL1RAPL1Q9NZN1 696 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 STOML1Q9UBI4 398 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
USP3-203ENST00000538686 A8MUI8 341 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 BPIFB4P59827 614 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 TEFQ10587 303 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 UAP1Q16222 522 aaPredicted RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 FOXB2Q5VYV0 432 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 KRT40Q6A162 431 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 HIC2Q96JB3 615 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CCDC42Q96M95 316 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 OLFM3Q96PB7 478 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 MTRQ99707 1265 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CENPKQ9BS16 269 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 ZNF148Q9UQR1 794 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 ESYT3A0FGR9 886 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 H7C1D1 291 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 NVLO15381 856 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 BCRP11274 1271 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 KCNA3P22001 575 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 MMP13P45452 471 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 SERPINB4P48594 390 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 DNM2P50570 870 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CACNA2D1P54289 1103 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 MCL1Q07820 350 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 PAK1Q13153 545 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 SEPT14Q6ZU15 432 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 LRRC34Q8IZ02 419 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 IFIH1Q9BYX4 1025 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 ESF1Q9H501 851 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 TUBA8Q9NY65 449 aaPredicted RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 TFR2Q9UP52 801 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 ATP8A1Q9Y2Q0 1164 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 TMED5Q9Y3A6 229 aa13.57□□□□□ -0.24
USP3-203ENST00000538686 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
USP3-203ENST00000538686 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 CES2O00748 559 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 PEX11AO75192 247 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 CHN1P15882 459 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 VHLP40337 213 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 USP46P62068 366 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 CNPY1Q3B7I2 92 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 KLC3Q6P597 504 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 NCCRP1Q6ZVX7 275 aaPredicted RBP13.56□□□□□ -0.24
USP3-203ENST00000538686 ZNF554Q86TJ5 538 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 LONP2Q86WA8 852 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 UBLCP1Q8WVY7 318 aaPredicted RBP13.56□□□□□ -0.24
USP3-203ENST00000538686 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 CATSPER2Q96P56 530 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 STMN4Q9H169 189 aaPredicted RBP13.56□□□□□ -0.24
USP3-203ENST00000538686 PDS5AQ29RF7 1337 aaKnown RBP13.56□□□□□ -0.24
USP3-203ENST00000538686 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
USP3-203ENST00000538686 A0A1W2PQJ5 194 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 BIRC5O15392 142 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 PJA2O43164 708 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 LCA5LO95447 670 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 OCRLQ01968 901 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 BTG3Q14201 252 aaPredicted RBP13.55□□□□□ -0.24
USP3-203ENST00000538686 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 FIGNQ5HY92 759 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 NR1H4Q96RI1 486 aaPredicted RBP13.55□□□□□ -0.24
USP3-203ENST00000538686 KRT12Q99456 494 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
USP3-203ENST00000538686 INTS9Q9NV88 658 aaKnown RBP13.55□□□□□ -0.24
USP3-203ENST00000538686 ARL2BPQ9Y2Y0 163 aa13.55□□□□□ -0.24
USP3-203ENST00000538686 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms