RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SEPT2Q15019 361 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 TNIP1Q15025 636 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 RBM26Q5T8P6 1007 aaKnown RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 ANKRD40Q6AI12 368 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 MOXD1Q6UVY6 613 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 KRT26Q7Z3Y9 468 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 ZFPM1Q8IX07 1006 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 GUF1Q8N442 669 aaKnown RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 MNS1Q8NEH6 495 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 CPLX3Q8WVH0 158 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 ATRIPQ8WXE1 791 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 LARP4BQ92615 738 aaKnown RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 HAS1Q92839 578 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 CUL5Q93034 780 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 IQCDQ96DY2 449 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 ERGIC2Q96RQ1 377 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 RAB34Q9BZG1 259 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 SEMA6BQ9H3T3 888 aa10.32□□□□□ -0.76
DDB1-211ENST00000538280 GBA2Q9HCG7 927 aaPredicted RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 MAGEC2Q9UBF1 373 aaPredicted RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 REXO2Q9Y3B8 237 aaKnown RBP10.32□□□□□ -0.76
DDB1-211ENST00000538280 HTTP42858 3142 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ATAD5Q96QE3 1844 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 TTC26A0AVF1 554 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 USP17L10C9JJH3 530 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 KIF5CO60282 957 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ECE2O60344 883 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDB1-211ENST00000538280 FCER1AP12319 257 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 TNNI2P48788 182 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 CLCN6P51797 869 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 CDK17Q00537 523 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 MCM6Q14566 821 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 UBE2SQ16763 222 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ARHGAP29Q52LW3 1261 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 MCTP2Q6DN12 878 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 RGMBQ6NW40 437 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 WDR59Q6PJI9 974 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 SIAH1Q8IUQ4 282 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 CSGALNACT2Q8N6G5 542 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 GMCL1P1Q8NEA9 526 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ACRBPQ8NEB7 543 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 OR8K1Q8NGG5 319 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 UBXN4Q92575 508 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
DDB1-211ENST00000538280 NUP88Q99567 741 aaPredicted RBP10.31□□□□□ -0.76
DDB1-211ENST00000538280 NUDT12Q9BQG2 462 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 TUBGCP2Q9BSJ2 902 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 ZNF446Q9NWS9 450 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 RNF186Q9NXI6 227 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 SYNPO2Q9UMS6 1093 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 KDM3AQ9Y4C1 1321 aa10.31□□□□□ -0.76
DDB1-211ENST00000538280 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 POTEMA6NI47 508 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 B4DLN1 442 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 ATP8B1O43520 1251 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 ENTPD3O75355 529 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 TRPA1O75762 1119 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 NDUFA10O95299 355 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 SLC10A3P09131 477 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 EEF2P13639 858 aaKnown RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 HNRNPH3P31942 346 aaKnown RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 USP11P51784 963 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 HERVK_113P62684 666 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 CBX1P83916 185 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 AP3B2Q13367 1082 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 CCDC96Q2M329 555 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 QRICH1Q2TAL8 776 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 KRT79Q5XKE5 535 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 TMEM179Q6ZVK1 233 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 MOB2Q70IA6 237 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 KCNK18Q7Z418 384 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 RASAL3Q86YV0 1011 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 TEX2Q8IWB9 1127 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 SLC35F6Q8N357 371 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 DNAJC19Q96DA6 116 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 GMCL1Q96IK5 515 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 CHP1Q99653 195 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 TMX4Q9H1E5 349 aaPredicted RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 KANSL2Q9H9L4 492 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 KCNMB3Q9NPA1 279 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 CDC23Q9UJX2 597 aa10.3□□□□□ -0.76
DDB1-211ENST00000538280 LUC7L2Q9Y383 392 aaKnown RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
DDB1-211ENST00000538280 SLC16A2P36021 539 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms