RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RAB6AP20340 208 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 EIF4A3P38919 411 aaKnown RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 ANP32AP39687 249 aaKnown RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 CDK8P49336 464 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 KIAA2012Q0VF49 1180 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 TTLL4Q14679 1199 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 PPM1JQ5JR12 505 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 LRFN4Q6PJG9 635 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 BNC2Q6ZN30 1099 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 CCDC84Q86UT8 332 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 SLC51AQ86UW1 340 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 AACSQ86V21 672 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 CLASRPQ8N2M8 674 aaKnown RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 VGLL2Q8N8G2 317 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 GOLM1Q8NBJ4 401 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 RNF214Q8ND24 703 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF296Q8WUU4 475 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 GCC1Q96CN9 775 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 GPATCH3Q96I76 525 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 NEUROD6Q96NK8 337 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 VPS33BQ9H267 617 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 SSU72Q9NP77 194 aaKnown RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 GNL3LQ9NVN8 582 aaKnown RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 RNF181Q9P0P0 153 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 POLLQ9UGP5 575 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 MED23Q9ULK4 1368 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 SNED1Q8TER0 1413 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 TIAM2Q8IVF5 1701 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 A0A1B0GUL7 405 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 SNAP23O00161 211 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 ECE2O60344 883 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 SASH1O94885 1247 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 HIBADHP31937 336 aaKnown RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 EIF6P56537 245 aaKnown RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 MAP7Q14244 749 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 TNNI3KQ59H18 835 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 SNAP47Q5SQN1 464 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 FBXL19Q6PCT2 694 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 PAOXQ6QHF9 649 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 C15orf52Q6ZUT6 534 aaKnown RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 USP48Q86UV5 1035 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 SMYD4Q8IYR2 804 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 GATAD2BQ8WXI9 593 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 EZH1Q92800 747 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 GAL3ST3Q96A11 431 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 PLPPR2Q96GM1 343 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 RHOVQ96L33 236 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 GPR101Q96P66 508 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-208ENST00000538266 COA1Q9GZY4 146 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 ACSS3Q9H6R3 686 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 DCTPP1Q9H773 170 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 DBNDD1Q9H9R9 158 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 IL1RAPL2Q9NP60 686 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 GPR108Q9NPR9 543 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 PCOLCE2Q9UKZ9 415 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 ZNRF3Q9ULT6 936 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 FPGT-TNNI3KV9GXZ4 949 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 ARAP2Q8WZ64 1704 aa5.23□□□□□ -1.57
SNHG1-208ENST00000538266 SBF1O95248 1867 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 CCDC88AQ3V6T2 1871 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 FAM221AA4D161 298 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 WTIPA6NIX2 430 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 GFRA2O00451 464 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 FANCGO15287 622 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 DYRK3O43781 588 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 BPNT1O95861 308 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 F13A1P00488 732 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 IGHDP01880 384 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 KLRK1P26718 216 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 GYG1P46976 350 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 TIMM10P62072 90 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 HDLBPQ00341 1268 aaKnown RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 RPL6Q02878 288 aaKnown RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 RING1Q06587 406 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF394Q53GI3 561 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 CCDC158Q5M9N0 1113 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 WIPI1Q5MNZ9 446 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 TTC39AQ5SRH9 613 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 ANKRD45Q5TZF3 282 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 CENPQQ7L2Z9 268 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 CDC37L1Q7L3B6 337 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 METTL16Q86W50 562 aaKnown RBP5.22□□□□□ -1.57
SNHG1-208ENST00000538266 NT5DC4Q86YG4 428 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 SMC5Q8IY18 1101 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 SEMA6CQ9H3T2 930 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 DAGLAQ9Y4D2 1042 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 CHD4Q14839 1912 aa5.22□□□□□ -1.57
SNHG1-208ENST00000538266 MYH13Q9UKX3 1938 aa5.21□□□□□ -1.57
SNHG1-208ENST00000538266 DICER1Q9UPY3 1922 aaKnown RBP5.21□□□□□ -1.57
SNHG1-208ENST00000538266 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 SMARCA5O60264 1052 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-208ENST00000538266 GREM1O60565 184 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 CILPO75339 1184 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 RAD17O75943 681 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 UQCRFS1P1P0C7P4 283 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 FGFR2P21802 821 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 GARTP22102 1010 aa5.21□□□□□ -1.58
SNHG1-208ENST00000538266 ADORA1P30542 326 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms