RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 USP17L18D6R9N7 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L22D6RA61 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L17D6RBQ6 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L19D6RCP7 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L20D6RJB6 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TBC1D8O95759 1140 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 KIF11P52732 1056 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PEX3P56589 373 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L24Q0WX57 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 EXOC3L4Q17RC7 722 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 RSBN1LQ6PCB5 846 aaPredicted RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L6PQ6QN14 398 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 FBF1Q8TES7 1133 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 NT5C1BQ96P26 610 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 NUCKS1Q9H1E3 243 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 SLITRK6Q9H5Y7 841 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ZC3H13Q5T200 1668 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 ITSN1Q15811 1721 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 SETBP1Q9Y6X0 1596 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ACTN4O43707 911 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 BRD1O95696 1058 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 CLUL1Q15846 466 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ADAT2Q7Z6V5 191 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 SIRT2Q8IXJ6 389 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 FAM149B1Q96BN6 582 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 SPATA33Q96N06 139 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TTC14Q96N46 770 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 MSTO1Q9BUK6 570 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 XPO4Q9C0E2 1151 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 METTL14Q9HCE5 456 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ABCC12Q96J65 1359 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 SLC4A1P02730 911 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PKP1Q13835 747 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 FAM186BQ8IYM0 893 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ADGRF4Q8IZF3 695 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 AK8Q96MA6 479 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 AFG3L2Q9Y4W6 797 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ATP8B3O60423 1300 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 GIPC1O14908 333 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 XPAP23025 273 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 TRAPPC10P48553 1259 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MYO1EQ12965 1108 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 PRIMPOLQ96LW4 560 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ZNF302Q9NR11 478 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PCDHB6Q9Y5E3 794 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PLCG1P19174 1290 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PTK2Q05397 1052 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 CEP128Q6ZU80 1094 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SAMD7Q7Z3H4 446 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 TCP11Q8WWU5 503 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 CHAMP1Q96JM3 812 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 OSBPL3Q9H4L5 887 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PARVGQ9HBI0 331 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 LMBRD1Q9NUN5 540 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 INO80Q9ULG1 1556 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 LRRN2O75325 713 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 IFNB1P01574 187 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 NSFP46459 744 aaKnown RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 JAK3P52333 1124 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 TWF2Q6IBS0 349 aaKnown RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 CCDC110Q8TBZ0 833 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 NSUN6Q8TEA1 469 aaKnown RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 SKA2Q8WVK7 121 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 HEXIM2Q96MH2 286 aaKnown RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 TMEM206Q9H813 350 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ZFYVE28Q9HCC9 887 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ZNF70Q9UC06 446 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 ZKSCAN5Q9Y2L8 839 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PREX1Q8TCU6 1659 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 A0A087WWV3 80 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ALDH3A1P30838 453 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SLC12A2P55011 1212 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 TSTA3Q13630 321 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 TTBK2Q6IQ55 1244 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 RFX6Q8HWS3 928 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 RHPN2Q8IUC4 686 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 OR6J1Q8NGC5 347 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ACAD9Q9H845 621 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 VPS37BQ9H9H4 285 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SLC38A10Q9HBR0 1119 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MAGED2Q9UNF1 606 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 RPAP1Q9BWH6 1393 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 F5H6K3 240 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA8SH3BPF8 625 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PPP6R2O75170 966 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 AKR1B1P15121 316 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 HUNKP57058 714 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 KIF23Q02241 960 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 KLRC3Q07444 240 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 STYK1Q6J9G0 422 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 THNSL1Q8IYQ7 743 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SMC6Q96SB8 1091 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MIS12Q9H081 205 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MYOZ2Q9NPC6 264 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms