RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GNA11P29992 359 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 ITGB3BPQ13352 177 aaPredicted RBP14.95□□□□□ -0.02
CHFR-216ENST00000538235 INF2Q27J81 1249 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 IQSEC1Q6DN90 963 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 FBXO18Q8NFZ0 1043 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 TBCKQ8TEA7 893 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 SCFD2Q8WU76 684 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 MXRA8Q9BRK3 442 aa14.95□□□□□ -0.02
CHFR-216ENST00000538235 DYNC1LI2O43237 492 aaPredicted RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 SLC37A4O43826 429 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 MSCO60682 206 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 C6orf222P0C671 652 aaPredicted RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 PIK3AP1Q6ZUJ8 805 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 C8orf76Q96K31 380 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 MRVI1Q9Y6F6 885 aa14.94□□□□□ -0.02
CHFR-216ENST00000538235 MYH9P35579 1960 aaKnown RBP14.94□□□□□ -0.02
CHFR-216ENST00000538235 GRIN2DO15399 1336 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 PDE4DIPQ5VU43 2346 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 DNM1LO00429 736 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 MEIS1O00470 390 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 GGPS1O95749 300 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
CHFR-216ENST00000538235 CIITAP33076 1130 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 KRT2P35908 639 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 RGS19P49795 217 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 TTLL4Q14679 1199 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 HSDL1Q3SXM5 330 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 TEX2Q8IWB9 1127 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 FAM177A1Q8N128 213 aaPredicted RBP14.93□□□□□ -0.02
CHFR-216ENST00000538235 OR6J1Q8NGC5 347 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 AFG1LQ8WV93 481 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 WASF1Q92558 559 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 GPRASP2Q96D09 838 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 MBOAT7Q96N66 472 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 KCNH7Q9NS40 1196 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 PHF24Q9UPV7 400 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 TANC1Q9C0D5 1861 aa14.93□□□□□ -0.02
CHFR-216ENST00000538235 A0A1W2PQ45 241 aaPredicted RBP14.92□□□□□ -0.02
CHFR-216ENST00000538235 A0A1W2PQY0 241 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 DHX15O43143 795 aaKnown RBP14.92□□□□□ -0.02
CHFR-216ENST00000538235 FIBPO43427 364 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 MMP3P08254 477 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 NBR1Q14596 966 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 KCNA10Q16322 511 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 FSCN1Q16658 493 aaKnown RBP14.92□□□□□ -0.02
CHFR-216ENST00000538235 CEP55Q53EZ4 464 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 CELF3Q5SZQ8 465 aaKnown RBP14.92□□□□□ -0.02
CHFR-216ENST00000538235 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
CHFR-216ENST00000538235 AGO4Q9HCK5 861 aaKnown RBP14.92□□□□□ -0.02
CHFR-216ENST00000538235 CCNE2O96020 404 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 GH1P01241 217 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 ASGR1P07306 291 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 HOXD8P13378 290 aaPredicted RBP14.91□□□□□ -0.02
CHFR-216ENST00000538235 ACLYP53396 1101 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 PSMC6P62333 389 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 MTMR1Q13613 665 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 NONOQ15233 471 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHFR-216ENST00000538235 LRRC26Q2I0M4 334 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 CXCL17Q6UXB2 119 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 CYFIP1Q7L576 1253 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 KRT25Q7Z3Z0 450 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 ANKLE1Q8NAG6 615 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 KAT2BQ92831 832 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 EMID1Q96A84 441 aaPredicted RBP14.91□□□□□ -0.02
CHFR-216ENST00000538235 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 SCN5AQ14524 2016 aa14.91□□□□□ -0.02
CHFR-216ENST00000538235 A6NJR5 290 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 MSH4O15457 936 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 STAM2O75886 525 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 ZNF286BP0CG31 522 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 TOB1P50616 345 aaPredicted RBP14.9□□□□□ -0.02
CHFR-216ENST00000538235 PURAQ00577 322 aaKnown RBP14.9□□□□□ -0.02
CHFR-216ENST00000538235 SP4Q02446 784 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 PKP1Q13835 747 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 HIC1Q14526 733 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 PRR16Q569H4 304 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 GNASQ5JWF2 1037 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 PCYT2Q99447 389 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 MPHOSPH6Q99547 160 aaKnown RBP14.9□□□□□ -0.02
CHFR-216ENST00000538235 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 Q9Y3F1 56 aa14.9□□□□□ -0.02
CHFR-216ENST00000538235 CYP3A7-CYP3A51PA0A087WV96 503 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 GSTTP1A0A1W2PQM5 241 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 B4DLN1 442 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 NKRFO15226 690 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms