RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	FAM133B	Q5BKY9	247 aa	Known RBP	11.65	□□□□□ -0.54
POLE-210	ENST00000537064	USP40	Q9NVE5	1235 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	PCDHB6	Q9Y5E3	794 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	NCKAP5L	Q9HCH0	1330 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	GOLGA8Q	A0A0J9YX86	632 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064		A0A1W2PQJ5	194 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	GOLGA8O	A6NCC3	632 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	FAM187A	A6NFU0	413 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	GOLGA8N	F8WBI6	632 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	FBXW10	Q5XX13	1052 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	MAGOHB	Q96A72	148 aa	Known RBP	11.65	□□□□□ -0.54
POLE-210	ENST00000537064	MXD3	Q9BW11	206 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	CARD10	Q9BWT7	1032 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	TMEM60	Q9H2L4	133 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	SRRM3	A6NNA2	597 aa	Predicted RBP	11.65	□□□□□ -0.54
POLE-210	ENST00000537064	GGPS1	O95749	300 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	UBN2	Q6ZU65	1347 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	MAP3K7CL	P57077	242 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	ADAM9	Q13443	819 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	SWT1	Q5T5J6	900 aa	Known RBP	11.65	□□□□□ -0.54
POLE-210	ENST00000537064	RHOT2	Q8IXI1	618 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	DYM	Q7RTS9	669 aa		11.65	□□□□□ -0.54
POLE-210	ENST00000537064	ECEL1	O95672	775 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	IL2RB	P14784	551 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	CXCR5	P32302	372 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	GRAMD1C	Q8IYS0	662 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	RPGR	Q92834	1020 aa	Known RBP	11.65	□□□□□ -0.55
POLE-210	ENST00000537064	FAM89A	Q96GI7	184 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	ZNF496	Q96IT1	587 aa	Predicted RBP	11.65	□□□□□ -0.55
POLE-210	ENST00000537064	GGA2	Q9UJY4	613 aa		11.65	□□□□□ -0.55
POLE-210	ENST00000537064	CDC37	Q16543	378 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	PPP4R1	Q8TF05	950 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	VCPKMT	Q9H867	229 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	AGTPBP1	Q9UPW5	1226 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	PCDHB13	Q9Y5F0	798 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	AFP	P02771	609 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	ATP1A1	P05023	1023 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	5e-7	■■■□□ 16.5
POLE-210	ENST00000537064	EPC1	Q9H2F5	836 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SMCO2	A6NFE2	343 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	GCNT3	O95395	438 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	CHGB	P05060	677 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	OSBP2	Q969R2	916 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	NUF2	Q9BZD4	464 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	GSTA1	P08263	222 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	DHX34	Q14147	1143 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	TRAPPC11	Q7Z392	1133 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	CADPS2	Q86UW7	1296 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SLC17A8	Q8NDX2	589 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	NLRP3	Q96P20	1036 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	CDHR2	Q9BYE9	1310 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	TTC26	A0AVF1	554 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	MAGOH	P61326	146 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	MRPS35	P82673	323 aa	Known RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SLC30A9	Q6PML9	568 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	MORC4	Q8TE76	937 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	MYO1E	Q12965	1108 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SSX2IP	Q9Y2D8	614 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SALL3	Q9BXA9	1300 aa		11.64	□□□□□ -0.55
POLE-210	ENST00000537064	SSU72P8	A0A1W2PR75	194 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	OGFOD1	Q8N543	542 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PIP4K2C	Q8TBX8	421 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PRPF6	O94906	941 aa	Known RBP	11.63	□□□□□ -0.55
POLE-210	ENST00000537064	IFNAR2	P48551	515 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	YTHDF3	Q7Z739	585 aa	Known RBP	11.63	□□□□□ -0.55
POLE-210	ENST00000537064	CCDC89	Q8N998	374 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	SLC39A2	Q9NP94	309 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	ANKRD65	E5RJM6	399 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	GPBP1	Q86WP2	473 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	EXOC5	O00471	708 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	MAP2K7	O14733	419 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	SRGAP2	O75044	1071 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PLTP	P55058	493 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	VPS37B	Q9H9H4	285 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	GAP43	P17677	238 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	STAMBPL1	Q96FJ0	436 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	KDM4C	Q9H3R0	1056 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	ATP6V0A4	Q9HBG4	840 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	AP5Z1	O43299	807 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PALM	O75781	387 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PDE8B	O95263	885 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	CYP27A1	Q02318	531 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	NR5A1	Q13285	461 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	CFAP61	Q8NHU2	1237 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	PTPRM	P28827	1452 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	AGT	P01019	485 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	EPSTI1	Q96J88	318 aa		11.63	□□□□□ -0.55
POLE-210	ENST00000537064	CDK17	Q00537	523 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	ACTN3	Q08043	901 aa	Predicted RBP	11.62	□□□□□ -0.55
POLE-210	ENST00000537064	CYFIP2	Q96F07	1278 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	PCDHA12	Q9UN75	941 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	IPO5	O00410	1097 aa	Known RBP	11.62	□□□□□ -0.55
POLE-210	ENST00000537064	TEC	P42680	631 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	SPARCL1	Q14515	664 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	NAA35	Q5VZE5	725 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	RILP	Q96NA2	401 aa		11.62	□□□□□ -0.55
POLE-210	ENST00000537064	ELAC2	Q9BQ52	826 aa	Known RBP	11.62	□□□□□ -0.55

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