RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 KIF5CO60282 957 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 PLA2G4BP0C869 781 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 ZSCAN20P17040 1043 aaPredicted RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 CASQ1P31415 396 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMG6-203ENST00000536871 TUBB4BP68371 445 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 CXCL9Q07325 125 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 TBC1D8BQ0IIM8 1120 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 USH1GQ495M9 461 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 PRR16Q569H4 304 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 CPLX3Q8WVH0 158 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 DNAJC19Q96DA6 116 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 HOOK2Q96ED9 719 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 CEP63Q96MT8 703 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 POLR3CQ9BUI4 534 aaPredicted RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 SLC39A2Q9NP94 309 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 MAP3K20Q9NYL2 800 aaKnown RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 CGNQ9P2M7 1197 aaKnown RBP15.1■□□□□ 0.01
SMG6-203ENST00000536871 ZNF280AP59817 542 aaPredicted RBP15.09■□□□□ 0.01
SMG6-203ENST00000536871 JAG1P78504 1218 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 FKBP3Q00688 224 aaKnown RBP15.09■□□□□ 0.01
SMG6-203ENST00000536871 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
SMG6-203ENST00000536871 GOLGA8FQ08AF8 430 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 GOLGA8DPQ0D2H9 430 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 COASYQ13057 564 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 MAN2A1Q16706 1144 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 TOGARAM2Q6ZUX3 1019 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 DYMQ7RTS9 669 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 KIAA1024Q9UPX6 916 aa15.09■□□□□ 0.01
SMG6-203ENST00000536871 LTBP3Q9NS15 1303 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 FRMD3A2A2Y4 597 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 PES1O00541 588 aaKnown RBP15.08■□□□□ 0.01
SMG6-203ENST00000536871 FDX1P10109 184 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 GNG11P61952 73 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 ZBED6P86452 979 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 CDK17Q00537 523 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 SPIRE1Q08AE8 756 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 FAM83BQ5T0W9 1011 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 NUDT12Q9BQG2 462 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 SEMA6BQ9H3T3 888 aa15.08■□□□□ 0.01
SMG6-203ENST00000536871 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0.01
SMG6-203ENST00000536871 SOWAHDA6NJG2 315 aa15.08■□□□□ 0
SMG6-203ENST00000536871 WNT10BO00744 389 aa15.08■□□□□ 0
SMG6-203ENST00000536871 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
SMG6-203ENST00000536871 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
SMG6-203ENST00000536871 ECE1P42892 770 aa15.08■□□□□ 0
SMG6-203ENST00000536871 KRT83P78385 493 aa15.08■□□□□ 0
SMG6-203ENST00000536871 PTPN21Q16825 1174 aa15.08■□□□□ 0
SMG6-203ENST00000536871 VWA3BQ502W6 1294 aa15.08■□□□□ 0
SMG6-203ENST00000536871 ZNF662Q6ZS27 426 aa15.08■□□□□ 0
SMG6-203ENST00000536871 GPBP1Q86WP2 473 aa15.08■□□□□ 0
SMG6-203ENST00000536871 CCDC170Q8IYT3 715 aa15.08■□□□□ 0
SMG6-203ENST00000536871 SYT2Q8N9I0 419 aaPredicted RBP15.08■□□□□ 0
SMG6-203ENST00000536871 LENG9Q96B70 501 aa15.08■□□□□ 0
SMG6-203ENST00000536871 MTFR1LQ9H019 292 aa15.08■□□□□ 0
SMG6-203ENST00000536871 TUFT1Q9NNX1 390 aa15.08■□□□□ 0
SMG6-203ENST00000536871 PGAP2Q9UHJ9 254 aa15.08■□□□□ 0
SMG6-203ENST00000536871 IPO7O95373 1038 aaKnown RBP15.07■□□□□ 0
SMG6-203ENST00000536871 KRT18P05783 430 aaKnown RBP15.07■□□□□ 0
SMG6-203ENST00000536871 CYP11B2P19099 503 aa15.07■□□□□ 0
SMG6-203ENST00000536871 CYLC1P35663 651 aaPredicted RBP15.07■□□□□ 0
SMG6-203ENST00000536871 NCBP1Q09161 790 aaKnown RBP15.07■□□□□ 0
SMG6-203ENST00000536871 MEA1Q16626 185 aa15.07■□□□□ 0
SMG6-203ENST00000536871 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
SMG6-203ENST00000536871 ARHGAP29Q52LW3 1261 aa15.07■□□□□ 0
SMG6-203ENST00000536871 RAD9BQ6WBX8 426 aa15.07■□□□□ 0
SMG6-203ENST00000536871 KCNK18Q7Z418 384 aa15.07■□□□□ 0
SMG6-203ENST00000536871 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
SMG6-203ENST00000536871 SPICE1Q8N0Z3 855 aa15.07■□□□□ 0
SMG6-203ENST00000536871 ACER1Q8TDN7 264 aa15.07■□□□□ 0
SMG6-203ENST00000536871 WDR11Q9BZH6 1224 aa15.07■□□□□ 0
SMG6-203ENST00000536871 TMEM39BQ9GZU3 492 aa15.07■□□□□ 0
SMG6-203ENST00000536871 ZNF215Q9UL58 517 aaPredicted RBP15.07■□□□□ 0
SMG6-203ENST00000536871 TTC26A0AVF1 554 aa15.06■□□□□ 0
SMG6-203ENST00000536871 B4DLN1 442 aa15.06■□□□□ 0
SMG6-203ENST00000536871 OPLAHO14841 1288 aa15.06■□□□□ 0
SMG6-203ENST00000536871 SLC12A3P55017 1021 aa15.06■□□□□ 0
SMG6-203ENST00000536871 MARSP56192 900 aaKnown RBP15.06■□□□□ 0
SMG6-203ENST00000536871 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
SMG6-203ENST00000536871 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
SMG6-203ENST00000536871 DEFB132Q7Z7B7 95 aa15.06■□□□□ 0
SMG6-203ENST00000536871 EHBP1Q8NDI1 1231 aa15.06■□□□□ 0
SMG6-203ENST00000536871 NUCKS1Q9H1E3 243 aaKnown RBP15.06■□□□□ 0
SMG6-203ENST00000536871 MYH7BA7E2Y1 1941 aa15.06■□□□□ 0
SMG6-203ENST00000536871 POTEB3A0JP26 581 aa15.06■□□□□ 0
SMG6-203ENST00000536871 POTECB2RU33 542 aa15.06■□□□□ 0
SMG6-203ENST00000536871 FAM86B1E9PN63 330 aa15.06■□□□□ 0
SMG6-203ENST00000536871 MSH4O15457 936 aa15.06■□□□□ 0
SMG6-203ENST00000536871 COBLO75128 1261 aa15.06■□□□□ 0
SMG6-203ENST00000536871 SSBP05455 408 aaKnown RBP eCLIP15.06■□□□□ 0
SMG6-203ENST00000536871 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
SMG6-203ENST00000536871 GAP43P17677 238 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms