RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PKN1Q16512 942 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 ANKLE2Q86XL3 938 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 ST13P5Q8NFI4 369 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-207ENST00000536634 BHLHE22Q8NFJ8 381 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-207ENST00000536634 DPF3Q92784 378 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 KCNN1Q92952 543 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 NBPF4Q96M43 638 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 MTA3Q9BTC8 594 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 GCM1Q9NP62 436 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 HCFC2Q9Y5Z7 792 aa8.15□□□□□ -1.1
CLIP1-207ENST00000536634 ZC3H13Q5T200 1668 aaKnown RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 A0A1W2PQJ5 194 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 SERINC3Q13530 473 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 CBX2Q14781 532 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 SF3A1Q15459 793 aaKnown RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 PLEKHN1Q494U1 663 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 SPATC1Q76KD6 591 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 RXFP1Q9HBX9 757 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
CLIP1-207ENST00000536634 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-207ENST00000536634 PLEKHH2Q8IVE3 1493 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 NLRP1Q9C000 1473 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 MBD5Q9P267 1494 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 ZNF644Q9H582 1327 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-207ENST00000536634 PDPK1O15530 556 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 SRGAP3O43295 1099 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 NPHS1O60500 1241 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 SEMA7AO75326 666 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 TMEM253P0C7T8 217 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 GLI4P10075 376 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 GLDCP23378 1020 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 DLG4P78352 724 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 TMEM132EQ6IEE7 984 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 ATG14Q6ZNE5 492 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 TMC6Q7Z403 805 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 LZTR1Q8N653 840 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 IER2Q9BTL4 223 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 CD320Q9NPF0 282 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 CFDP1Q9UEE9 299 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-207ENST00000536634 FAM135AQ9P2D6 1515 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 FYCO1Q9BQS8 1478 aa8.13□□□□□ -1.11
CLIP1-207ENST00000536634 MIA2Q96PC5 1412 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 DHX29Q7Z478 1369 aaKnown RBP8.12□□□□□ -1.11
CLIP1-207ENST00000536634 NFIBO00712 420 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 CPP00450 1065 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 CYBBP04839 570 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 EPHB3P54753 998 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 YOD1Q5VVQ6 348 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-207ENST00000536634 PAQR3Q6TCH7 311 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 PPIL6Q8IXY8 311 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-207ENST00000536634 SREK1Q8WXA9 508 aaKnown RBP8.12□□□□□ -1.11
CLIP1-207ENST00000536634 CNTD2Q9H8S5 307 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 SIRPGQ9P1W8 387 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
CLIP1-207ENST00000536634 TIAM1Q13009 1591 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 ZC3H12DA2A288 527 aaKnown RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 ABLIM1O14639 778 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 MEFVO15553 781 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 DLX3O60479 287 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 FUCA1P04066 466 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 LCP1P13796 627 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 CDR1P51861 262 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 RASGRF1Q13972 1273 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 HSP90AA2PQ14568 343 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 ACBD5Q5T8D3 534 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 E4F1Q66K89 784 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 DIO2Q92813 273 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 AARSD1Q9BTE6 412 aaKnown RBP8.11□□□□□ -1.11
CLIP1-207ENST00000536634 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 SIRT5Q9NXA8 310 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 BTG4Q9NY30 223 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 PFDN2Q9UHV9 154 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
CLIP1-207ENST00000536634 CCNB3Q8WWL7 1395 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 FAM221BA6H8Z2 402 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 KIF3BO15066 747 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 PRODHO43272 600 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 RASA3Q14644 834 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 NR1I3Q14994 352 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 TESK1Q15569 626 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 IQCEQ6IPM2 695 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 TEX2Q8IWB9 1127 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 RCBTB1Q8NDN9 531 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 PMFBP1Q8TBY8 1022 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 PLEKHO2Q8TD55 490 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
CLIP1-207ENST00000536634 SPATA9Q9BWV2 254 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms