RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PGM5Q15124 567 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 ANKRD1Q15327 319 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 TYW1BQ6NUM6 668 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 CXCL17Q6UXB2 119 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 SEPT14Q6ZU15 432 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 SLC26A6Q9BXS9 759 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 C22orf23Q9BZE7 217 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 IL23AQ9NPF7 189 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 TPCN1Q9ULQ1 816 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 LRRC37A2A6NM11 1700 aa20.64■□□□□ 0.89
CCDC61-201ENST00000536603 hCG_1984214I3L0E3 225 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 STXBP3O00186 592 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 CPLX1O14810 134 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 DYNC1LI2O43237 492 aaPredicted RBP20.63■□□□□ 0.89
CCDC61-201ENST00000536603 ZEB2O60315 1214 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
CCDC61-201ENST00000536603 CABYRO75952 493 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 FGBP02675 491 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 UBE2SQ16763 222 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 PFKFB3Q16875 520 aaPredicted RBP20.63■□□□□ 0.89
CCDC61-201ENST00000536603 DUSP28Q4G0W2 176 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 TLK2Q86UE8 772 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 ZNF713Q8N859 430 aaPredicted RBP20.63■□□□□ 0.89
CCDC61-201ENST00000536603 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 SLKQ9H2G2 1235 aaPredicted RBP20.63■□□□□ 0.89
CCDC61-201ENST00000536603 HIPK3Q9H422 1215 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
CCDC61-201ENST00000536603 CD4P01730 458 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 TXNP10599 105 aaKnown RBP20.62■□□□□ 0.89
CCDC61-201ENST00000536603 SCG2P13521 617 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 IGFBP4P22692 258 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 ITGA7Q13683 1181 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 TTLL4Q14679 1199 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 RAB30Q15771 203 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 PKN1Q16512 942 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
CCDC61-201ENST00000536603 VSIG10LQ86VR7 867 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 IL31RAQ8NI17 732 aa20.62■□□□□ 0.89
CCDC61-201ENST00000536603 ZFP91Q96JP5 570 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-201ENST00000536603 RNF26Q9BY78 433 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-201ENST00000536603 SMCO2A6NFE2 343 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 CTAGE5O15320 804 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 CCND2P30279 289 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 SCRN1Q12765 414 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 CCDC85BQ15834 202 aaPredicted RBP20.61■□□□□ 0.89
CCDC61-201ENST00000536603 RASIP1Q5U651 963 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 PPP1R18Q6NYC8 613 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 SLC28A3Q9HAS3 691 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 Q9Y3F1 56 aa20.61■□□□□ 0.89
CCDC61-201ENST00000536603 TNFRSF10AO00220 468 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 PFKFB2O60825 505 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 ARIH2O95376 493 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 CCL23P55773 120 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 SSRP1Q08945 709 aaKnown RBP20.6■□□□□ 0.89
CCDC61-201ENST00000536603 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
CCDC61-201ENST00000536603 OTOP2Q7RTS6 562 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 TRIM22Q8IYM9 498 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 HERVK_113Q902F9 699 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 COPS5Q92905 334 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 TBC1D32Q96NH3 1257 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 KIF2CQ99661 725 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 NKX2-4Q9H2Z4 354 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 RIC8AQ9NPQ8 531 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 GBF1Q92538 1859 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 CDH23Q9H251 3354 aa20.6■□□□□ 0.89
CCDC61-201ENST00000536603 SPDYE3A6NKU9 549 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 NKRFO15226 690 aaKnown RBP eCLIP20.59■□□□□ 0.89
CCDC61-201ENST00000536603 RBM25P49756 843 aaKnown RBP20.59■□□□□ 0.89
CCDC61-201ENST00000536603 ADCY7P51828 1080 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 NKX3-2P78367 333 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 ME3Q16798 604 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 CCDC62Q6P9F0 684 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 IL27Q8NEV9 243 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 UPF2Q9HAU5 1272 aaKnown RBP20.59■□□□□ 0.89
CCDC61-201ENST00000536603 CXXC1Q9P0U4 656 aaPredicted RBP20.59■□□□□ 0.89
CCDC61-201ENST00000536603 THEGQ9P2T0 379 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 PCDHA6Q9UN73 950 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 PCDHA8Q9Y5H6 950 aa20.59■□□□□ 0.89
CCDC61-201ENST00000536603 FRMPD4Q14CM0 1322 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 UMODL1Q5DID0 1318 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 RGS20O76081 388 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 MRPS9P82933 396 aaKnown RBP20.58■□□□□ 0.89
CCDC61-201ENST00000536603 SLC43A3Q8NBI5 491 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 OR6J1Q8NGC5 347 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 ATXN2LQ8WWM7 1075 aaKnown RBP20.58■□□□□ 0.89
CCDC61-201ENST00000536603 SEZ6LQ9BYH1 1024 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 GLT8D2Q9H1C3 349 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 TRPV6Q9H1D0 765 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 RTEL1Q9NZ71 1219 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.89
CCDC61-201ENST00000536603 ZBBXA8MT70 800 aa20.57■□□□□ 0.88
CCDC61-201ENST00000536603 VCANP13611 3396 aa20.57■□□□□ 0.88
CCDC61-201ENST00000536603 PSMC6P62333 389 aa20.57■□□□□ 0.88
CCDC61-201ENST00000536603 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
CCDC61-201ENST00000536603 NECAB1Q8N987 351 aa20.57■□□□□ 0.88
CCDC61-201ENST00000536603 CCDC12Q8WUD4 166 aaPredicted RBP20.57■□□□□ 0.88
CCDC61-201ENST00000536603 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
CCDC61-201ENST00000536603 SLC4A7Q9Y6M7 1214 aa20.57■□□□□ 0.88
CCDC61-201ENST00000536603 B4GALT4O60513 344 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms