RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ZNF577Q9BSK1 485 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 TAF1LQ8IZX4 1826 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 IRF6O14896 467 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 BMP15O95972 392 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 CYP2C8P10632 490 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 ATP2C1P98194 919 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-207ENST00000536513 MUM1L1Q5H9M0 696 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 FBXL16Q8N461 479 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 DPF2Q92785 391 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 GMLQ99445 158 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 RIPK3Q9Y572 518 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 ANKRD65E5RJM6 399 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 DNAH12Q6ZR08 3092 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 MICALL1Q8N3F8 863 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 CACTINQ8WUQ7 758 aaKnown RBP9.14□□□□□ -0.95
ABCA4-207ENST00000536513 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 TAAR1Q96RJ0 339 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 RIOX1Q9H6W3 641 aa9.14□□□□□ -0.95
ABCA4-207ENST00000536513 CCP110O43303 1012 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 RPN1P04843 607 aaKnown RBP9.13□□□□□ -0.95
ABCA4-207ENST00000536513 SLFN14P0C7P3 912 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 RPS6P62753 249 aaKnown RBP9.13□□□□□ -0.95
ABCA4-207ENST00000536513 VGLL4Q14135 290 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 E2F4Q16254 413 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 RNF207Q6ZRF8 634 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 SYCP3Q8IZU3 236 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 DISC1Q9NRI5 854 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 TMX2Q9Y320 296 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 MRPL11Q9Y3B7 192 aaKnown RBP9.13□□□□□ -0.95
ABCA4-207ENST00000536513 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
ABCA4-207ENST00000536513 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 CCDC40Q4G0X9 1142 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 CARD6Q9BX69 1037 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 BCAS3Q9H6U6 928 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 SCN9AQ15858 1988 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 CCDC169A6NNP5 214 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 FAM86B1E9PN63 330 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 CLIC2O15247 247 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 MAFGO15525 162 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 TBCAO75347 108 aaKnown RBP9.13□□□□□ -0.95
ABCA4-207ENST00000536513 ERLIN1O75477 346 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 IGBP1P78318 339 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 FILIP1LQ4L180 1135 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 KCNK18Q7Z418 384 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 PPFIBP1Q86W92 1011 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 EXOC8Q8IYI6 725 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 GPC2Q8N158 579 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 MTA3Q9BTC8 594 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 USP20Q9Y2K6 914 aa9.13□□□□□ -0.95
ABCA4-207ENST00000536513 MYH7P12883 1935 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 SYNRGQ9UMZ2 1314 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 USO1O60763 962 aaKnown RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 ARP10275 920 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 NAP1L1P55209 391 aaKnown RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 PSMC6P62333 389 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 TATDN1Q6P1N9 297 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 CSGALNACT2Q8N6G5 542 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 GLIS3Q8NEA6 775 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 IL31RAQ8NI17 732 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 KDM4CQ9H3R0 1056 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 AS3MTQ9HBK9 375 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 ZCCHC17Q9NP64 241 aaKnown RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 RIC8AQ9NPQ8 531 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 SCN7AQ01118 1682 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 CASQ1P31415 396 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 CCDC144BQ3MJ40 725 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 GIMAP7Q8NHV1 300 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
ABCA4-207ENST00000536513 EHD4Q9H223 541 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 RABEP2Q9H5N1 569 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
ABCA4-207ENST00000536513 PSMA7O14818 248 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 CELF2O95319 508 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 GCNT3O95395 438 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 TPM1P09493 284 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 PTPRAP18433 802 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 IREB2P48200 963 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 GYS2P54840 703 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 GSDMDP57764 484 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 CNTN2Q02246 1040 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 UBXN1Q04323 297 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 TREML2Q5T2D2 321 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 APOBEC3FQ8IUX4 373 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 NMRK2Q9NPI5 230 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 DNM3Q9UQ16 869 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SEC31AO94979 1220 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 CD44P16070 742 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 LONP1P36776 959 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 PRCPP42785 496 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SOX10P56693 466 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms