RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CTAGE8P0CG41 777 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 ZNF18P17022 549 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 SMARCA1P28370 1054 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 CTAGE6Q86UF2 777 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 CTAGE4Q8IX94 777 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 MKL1Q969V6 931 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 FAM212AQ96EL1 285 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 PSTPIP2Q9H939 334 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 POTEB2H3BUK9 544 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 MSL3Q8N5Y2 521 aaKnown RBP23.81■■□□□ 1.4
TRIM3-214ENST00000536344 AKR1B15C9JRZ8 316 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-214ENST00000536344 TTC19Q6DKK2 380 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-214ENST00000536344 MED4Q9NPJ6 270 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 NPM3O75607 178 aaKnown RBP23.8■■□□□ 1.4
TRIM3-214ENST00000536344 MAP2K2P36507 400 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 UBA7P41226 1012 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 GRIPAP1Q4V328 841 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 BANK1Q8NDB2 785 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 CEP89Q96ST8 783 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 CEP83Q9Y592 693 aa23.8■■□□□ 1.4
TRIM3-214ENST00000536344 PSME4Q14997 1843 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 STAT6P42226 847 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 RASA3Q14644 834 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 AGBL3Q8NEM8 1001 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 FAM169AQ9Y6X4 670 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 MYO1BO43795 1136 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 OR52Z1P0C646 297 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 CD44P16070 742 aaKnown RBP23.79■■□□□ 1.4
TRIM3-214ENST00000536344 SARSP49591 514 aaKnown RBP23.79■■□□□ 1.4
TRIM3-214ENST00000536344 FAM83BQ5T0W9 1011 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 ANKRD20A12PQ8NF67 263 aa23.79■■□□□ 1.4
TRIM3-214ENST00000536344 ZC3H4Q9UPT8 1303 aaKnown RBP23.79■■□□□ 1.4
TRIM3-214ENST00000536344 GMPSP49915 693 aaPredicted RBP23.78■■□□□ 1.4
TRIM3-214ENST00000536344 MORC3Q14149 939 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 NR1I3Q14994 352 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 ARL6IP4Q66PJ3 421 aaKnown RBP23.78■■□□□ 1.4
TRIM3-214ENST00000536344 PDXDC2PQ6P474 469 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 ZBTB21Q9ULJ3 1066 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 BMP3P12645 472 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 GGCXP38435 758 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 MICALL2Q8IY33 904 aa23.78■■□□□ 1.4
TRIM3-214ENST00000536344 HOXA13P31271 388 aaPredicted RBP23.77■■□□□ 1.4
TRIM3-214ENST00000536344 LONP1P36776 959 aaKnown RBP23.77■■□□□ 1.4
TRIM3-214ENST00000536344 DCAF4Q8WV16 495 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 CUL5Q93034 780 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 P2RX7Q99572 595 aaKnown RBP23.77■■□□□ 1.4
TRIM3-214ENST00000536344 RIC8AQ9NPQ8 531 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 HPCAL4Q9UM19 191 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 POTEMA6NI47 508 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 DPYDQ12882 1025 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 NAALADL2Q58DX5 795 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 HERC5Q9UII4 1024 aaKnown RBP23.77■■□□□ 1.4
TRIM3-214ENST00000536344 KIF13BQ9NQT8 1826 aa23.77■■□□□ 1.4
TRIM3-214ENST00000536344 ENC1O14682 589 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 KANK3Q6NY19 840 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 CCDC174Q6PII3 467 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 SH3RF1Q7Z6J0 888 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 FBXO28Q9NVF7 368 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 HDAC6Q9UBN7 1215 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 TRIM10Q9UDY6 481 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 SUFUQ9UMX1 484 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 PTGER2P43116 358 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 RRAGBQ5VZM2 374 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 DISC1Q9NRI5 854 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 SAMM50Q9Y512 469 aa23.76■■□□□ 1.39
TRIM3-214ENST00000536344 ESYT2A0FGR8 921 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 MYBL2P10244 700 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 CALCRLQ16602 461 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 CASP14P31944 242 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 SYDE2Q5VT97 1194 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 MTMR8Q96EF0 704 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 NAPGQ99747 312 aaPredicted RBP23.75■■□□□ 1.39
TRIM3-214ENST00000536344 NT5DC1Q5TFE4 455 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 TFR2Q9UP52 801 aa23.75■■□□□ 1.39
TRIM3-214ENST00000536344 MYH7BA7E2Y1 1941 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 SRGAP2O75044 1071 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 PLCG1P19174 1290 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 MRPL12P52815 198 aaKnown RBP23.74■■□□□ 1.39
TRIM3-214ENST00000536344 CABP7Q86V35 215 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 GBP3Q9H0R5 595 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 CNOT7Q9UIV1 285 aaKnown RBP23.74■■□□□ 1.39
TRIM3-214ENST00000536344 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 AGPSO00116 658 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 FXR1P51114 621 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRIM3-214ENST00000536344 IRAK1P51617 712 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 TBC1D5Q92609 795 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 GDAQ9Y2T3 454 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 FER1L6Q2WGJ9 1857 aa23.74■■□□□ 1.39
TRIM3-214ENST00000536344 ZNF541Q9H0D2 1346 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 AARSP49588 968 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRIM3-214ENST00000536344 SPATA20Q8TB22 786 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 PANX2Q96RD6 677 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 NUDT12Q9BQG2 462 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 RNF225M0QZC1 329 aaPredicted RBP23.73■■□□□ 1.39
TRIM3-214ENST00000536344 MARCH6O60337 910 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 ACBD3Q9H3P7 528 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 ARHGEF10LQ9HCE6 1279 aa23.73■■□□□ 1.39
TRIM3-214ENST00000536344 PCNTO95613 3336 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms