RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 FCHSD1Q86WN1 690 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.11□□□□□ -1.75
MCF2-210ENST00000536274 CYP4X1Q8N118 509 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 CCT6BQ92526 530 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 RAPGEF5Q92565 580 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 JAKMIP2Q96AA8 810 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 MS4A14Q96JA4 679 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 HELLSQ9NRZ9 838 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 SUN2Q9UH99 717 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ZNF180Q9UJW8 692 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 IQSEC3Q9UPP2 1182 aaPredicted RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 REXO2Q9Y3B8 237 aaKnown RBP4.11□□□□□ -1.75
MCF2-210ENST00000536274 HYOU1Q9Y4L1 999 aa4.11□□□□□ -1.75
MCF2-210ENST00000536274 ITIH6Q6UXX5 1313 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 A0A0D9SFI3 127 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 GMNCA6NCL1 334 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 GOLGA6L9A6NEM1 432 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 F8W031 263 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 IGF2BP3O00425 579 aaKnown RBP eCLIP4.1□□□□□ -1.75
MCF2-210ENST00000536274 FYB1O15117 783 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PPIP5K2O43314 1243 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 HMGB1P09429 215 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 FAM200BP0CF97 657 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 DHX9Q08211 1270 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 CBX3Q13185 183 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 GPR162Q16538 588 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ODF2Q5BJF6 829 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ZNF362Q5T0B9 420 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 TRAPPC11Q7Z392 1133 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 NANOGNBQ7Z5D8 188 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 YTHDF3Q7Z739 585 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 FAM114A1Q8IWE2 563 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ARHGAP18Q8N392 663 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 TRIML1Q8N9V2 468 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 EHBP1Q8NDI1 1231 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 LINS1Q8NG48 757 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ANKRD24Q8TF21 1146 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 CORO1BQ9BR76 489 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 IQCGQ9H095 443 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 INIPQ9NRY2 104 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PNMA3Q9UL41 463 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 FAM184BQ9ULE4 1060 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 SUGT1Q9Y2Z0 365 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PCDHA5Q9Y5H7 936 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 AFDNP55196 1824 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 LAMB4A4D0S4 1761 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PTPDC1A2A3K4 754 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 KIF28PB7ZC32 967 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 DPYSL4O14531 572 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 CBFA2T2O43439 604 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 TOMM70O94826 608 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 LDHAP00338 332 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 NAT2P11245 290 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 RPS6KB1P23443 525 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 SP100P23497 879 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 SERPINB4P48594 390 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 CYP27A1Q02318 531 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PLCB4Q15147 1175 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ALS2CLQ60I27 953 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 SDCCAG8Q86SQ7 713 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 METTL16Q86W50 562 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 CACNA2D3Q8IZS8 1091 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 MAGEC3Q8TD91 643 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 CTNNBL1Q8WYA6 563 aaPredicted RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 STAMQ92783 540 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 LRCH3Q96II8 777 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 FAM81BQ96LP2 452 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 AIFM3Q96NN9 605 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 LACRTQ9GZZ8 138 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 EMILIN3Q9NT22 766 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ARHGEF38Q9NXL2 777 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 CABP1Q9NZU7 370 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PLAAQ9Y263 795 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 ZNF711Q9Y462 761 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 HEY1Q9Y5J3 304 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 SAR1BQ9Y6B6 198 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 PALLDQ8WX93 1383 aa4.1□□□□□ -1.75
MCF2-210ENST00000536274 DDX60Q8IY21 1712 aaKnown RBP4.1□□□□□ -1.75
MCF2-210ENST00000536274 STXBP3O00186 592 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 CYP1A1P04798 512 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 GNAI2P04899 355 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 GYPCP04921 128 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 GLI1P08151 1106 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ZCCHC18P0CG32 403 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PYGMP11217 842 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 GRIN1Q05586 938 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ITGB3BPQ13352 177 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 PRPF4BQ13523 1007 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 BTG3Q14201 252 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 CFAP58Q5T655 872 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 CC2D2BQ6DHV5 1058 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 KANK3Q6NY19 840 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PI16Q6UXB8 463 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 GIGYF2Q6Y7W6 1299 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 KDM7AQ6ZMT4 941 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 RIC3Q7Z5B4 369 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 EXOC3L1Q86VI1 746 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms