RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FIBPO43427 364 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SORBS3O60504 671 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FOSBP53539 338 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GPRASP2Q96D09 838 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 A6NJR5 290 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ATP9AO75110 1047 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GGPS1O95749 300 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GH1P01241 217 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CYP3A4P08684 503 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 TGFB3P10600 412 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MCM2P49736 904 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SNX17Q15036 470 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MYSM1Q5VVJ2 828 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PCSK9Q8NBP7 692 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 WASF1Q92558 559 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 JADE2Q9NQC1 790 aa12.92□□□□□ -0.34
TNFRSF1A-208ENST00000536194 IGLV3-22A0A075B6J6 115 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MEIS1O00470 390 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MMP1P03956 469 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MMP3P08254 477 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ARP10275 920 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 KCNA2P16389 499 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CPT1AP50416 773 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PURAQ00577 322 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MTMR1Q13613 665 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 HSDL1Q3SXM5 330 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CEP55Q53EZ4 464 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 KRT40Q6A162 431 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 NLRX1Q86UT6 975 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 TNFRSF25Q93038 417 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 HTATIP2Q9BUP3 242 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 WDR81Q562E7 1941 aa12.91□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 XBP1P17861 261 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CIITAP33076 1130 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 NR5A1Q13285 461 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 LENG9Q96B70 501 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SENP7Q9BQF6 1050 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 STARD7Q9NQZ5 370 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 KCNH7Q9NS40 1196 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PKD2L1Q9P0L9 805 aa12.9□□□□□ -0.34
TNFRSF1A-208ENST00000536194 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ELP1O95163 1332 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZEB2O60315 1214 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MYL3P08590 195 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 RTP1P59025 263 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PSMC6P62333 389 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CUL4AQ13619 759 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NEDD9Q14511 834 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 INF2Q27J81 1249 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIM60Q495X7 471 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NIPA1Q7RTP0 329 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 KRT25Q7Z3Z0 450 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PLA2G4DQ86XP0 818 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 DPF3Q92784 378 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 C8orf76Q96K31 380 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MAFGO15525 162 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TDP2O95551 362 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms