RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PHOSPHO2Q8TCD6 241 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 KAT2BQ92831 832 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 PRDM12Q9H4Q4 367 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 SENP2Q9HC62 589 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 GTF2IRD1Q9UHL9 959 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
RTN3-207ENST00000536011 CHD7Q9P2D1 2997 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 ZNF286BP0CG31 522 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 HOXD8P13378 290 aaPredicted RBP15.15■□□□□ 0.02
RTN3-207ENST00000536011 SELPP16109 830 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 RBL2Q08999 1139 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 KIAA0753Q2KHM9 967 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 RNF20Q5VTR2 975 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 MYSM1Q5VVJ2 828 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 GDF6Q6KF10 455 aaPredicted RBP15.15■□□□□ 0.02
RTN3-207ENST00000536011 SYMPKQ92797 1274 aaKnown RBP15.15■□□□□ 0.02
RTN3-207ENST00000536011 ESYT1Q9BSJ8 1104 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 MLXIPQ9HAP2 919 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 ANO2Q9NQ90 1003 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
RTN3-207ENST00000536011 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
RTN3-207ENST00000536011 RGS20O76081 388 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 UBA1P22314 1058 aaKnown RBP15.14■□□□□ 0.01
RTN3-207ENST00000536011 LIFRP42702 1097 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 KCNJ6P48051 423 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 PTK7Q13308 1070 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 SLC35G1Q2M3R5 365 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 XRRA1Q6P2D8 792 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 LRRC8DQ7L1W4 858 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 SMARCC2Q8TAQ2 1214 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 ALG1Q9BT22 464 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
RTN3-207ENST00000536011 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
RTN3-207ENST00000536011 HDAC6Q9UBN7 1215 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
RTN3-207ENST00000536011 GBF1Q92538 1859 aa15.14■□□□□ 0.01
RTN3-207ENST00000536011 SPTBN5Q9NRC6 3674 aaKnown RBP15.13■□□□□ 0.01
RTN3-207ENST00000536011 HAS3O00219 553 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 SH2B2O14492 632 aaPredicted RBP15.13■□□□□ 0.01
RTN3-207ENST00000536011 SLC27A2O14975 620 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 FIBPO43427 364 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 EFCAB14O75071 495 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 RABGGTBP53611 331 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 NEDD9Q14511 834 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 HSDL1Q3SXM5 330 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 BMP2KLQ5H9B9 411 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 CENPQQ7L2Z9 268 aaPredicted RBP15.13■□□□□ 0.01
RTN3-207ENST00000536011 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
RTN3-207ENST00000536011 BAZ2BQ9UIF8 2168 aaKnown RBP15.13■□□□□ 0.01
RTN3-207ENST00000536011 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
RTN3-207ENST00000536011 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 PIK3CDO00329 1044 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 CKBP12277 381 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 IGFBP4P22692 258 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 ICAM3P32942 547 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 CNKSR3Q6P9H4 555 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 METTL7BQ6UX53 244 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 GIMAP8Q8ND71 665 aaPredicted RBP15.12■□□□□ 0.01
RTN3-207ENST00000536011 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
RTN3-207ENST00000536011 EMSYQ7Z589 1322 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 TRANK1O15050 2925 aa15.12■□□□□ 0.01
RTN3-207ENST00000536011 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 CA3P07451 260 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
RTN3-207ENST00000536011 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 NLRX1Q86UT6 975 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 HERC6Q8IVU3 1022 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 CDHR1Q96JP9 859 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 USP26Q9BXU7 913 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
RTN3-207ENST00000536011 MYO9BQ13459 2157 aa15.11■□□□□ 0.01
RTN3-207ENST00000536011 ABHD14A-ACY1A0A1B0GW23 586 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 H3BRB1 525 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 GTPBP6O43824 516 aaPredicted RBP15.1■□□□□ 0.01
RTN3-207ENST00000536011 SORBS3O60504 671 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 CXCL10P02778 98 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 GNAT1P11488 350 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 MRPS9P82933 396 aaKnown RBP15.1■□□□□ 0.01
RTN3-207ENST00000536011 SP2Q02086 613 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 NECTIN1Q15223 517 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 TJAP1Q5JTD0 557 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 ATXN2LQ8WWM7 1075 aaKnown RBP15.1■□□□□ 0.01
RTN3-207ENST00000536011 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
RTN3-207ENST00000536011 SENP7Q9BQF6 1050 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 C16orf70Q9BSU1 422 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms