RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 MCM3APO60318 1980 aa12.27□□□□□ -0.45
UBE3B-205ENST00000535900 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 DLL1O00548 723 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 MEIS2O14770 477 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 ADAMTS4O75173 837 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 YEATS4O95619 227 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 ALAS1P13196 640 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 HSD17B4P51659 736 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 USP11P51784 963 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 SNAP25P60880 206 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-205ENST00000535900 MAMDC4Q6UXC1 1216 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-205ENST00000535900 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 FOXD4L4Q8WXT5 416 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-205ENST00000535900 FAM161BQ96MY7 647 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-205ENST00000535900 ELP1O95163 1332 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 SMCHD1A6NHR9 2005 aa12.26□□□□□ -0.45
UBE3B-205ENST00000535900 TCHHQ07283 1943 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 DNAJC25-GNG10A0A024R161 153 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 MOXD2PA6NHM9 499 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 LAD1O00515 517 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 OPLAHO14841 1288 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 SNAI1O95863 264 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 RAG1P15918 1043 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 GCFC2P16383 781 aaKnown RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 NASPP49321 788 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 ACLYP53396 1101 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 SHHQ15465 462 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 MOXD1Q6UVY6 613 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 NEK8Q86SG6 692 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 KCNG4Q8TDN1 519 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 CLEC4DQ8WXI8 215 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-205ENST00000535900 MYH15Q9Y2K3 1946 aa12.25□□□□□ -0.45
UBE3B-205ENST00000535900 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 DUSP11O75319 330 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 NCLP19338 710 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 MROH7Q68CQ1 1323 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 XRRA1Q6P2D8 792 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 TSEN34Q9BSV6 310 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 ABHD16BQ9H3Z7 469 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
UBE3B-205ENST00000535900 TMEM39AQ9NV64 488 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 RCOR1Q9UKL0 485 aa12.24□□□□□ -0.45
UBE3B-205ENST00000535900 MYADML2A6NDP7 307 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 B4DLN1 442 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 MBD3O95983 291 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 CFBP00751 764 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 CYP3A4P08684 503 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 CST5P28325 142 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-205ENST00000535900 SREBF1P36956 1147 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 FPGSQ05932 587 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 SLC39A14Q15043 492 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 TTC38Q5R3I4 469 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 JAKMIP3Q5VZ66 844 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-205ENST00000535900 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 PCSK9Q8NBP7 692 aaKnown RBP12.23□□□□□ -0.45
UBE3B-205ENST00000535900 LINC00301Q8NCQ3 95 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 SPATA32Q96LK8 384 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 FGD4Q96M96 766 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 USP28Q96RU2 1077 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 ANO3Q9BYT9 981 aa12.23□□□□□ -0.45
UBE3B-205ENST00000535900 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
UBE3B-205ENST00000535900 DNAH12Q6ZR08 3092 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 FRMPD4Q14CM0 1322 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 CYP3A7-CYP3A51PA0A087WV96 503 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-205ENST00000535900 NFIBO00712 420 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 KIAA0355O15063 1070 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 ADCY6O43306 1168 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 PPP6R2O75170 966 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 ASGR1P07306 291 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 CYP3A7P24462 503 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 CIITAP33076 1130 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms