RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 CUL5Q93034 780 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 RMDN3Q96TC7 470 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 GNEQ9Y223 722 aaKnown RBP16.55■□□□□ 0.24
MSRB3-206ENST00000535664 ASTN1O14525 1302 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 MROH7Q68CQ1 1323 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 GCOM1H8Y6P7 765 aaPredicted RBP16.54■□□□□ 0.24
MSRB3-206ENST00000535664 MEIS2O14770 477 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
MSRB3-206ENST00000535664 CFBP00751 764 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
MSRB3-206ENST00000535664 KCNA10Q16322 511 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 UBE2SQ16763 222 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 KCNV1Q6PIU1 500 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 REXO1Q8N1G1 1221 aaKnown RBP16.54■□□□□ 0.24
MSRB3-206ENST00000535664 BICD2Q8TD16 824 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 GBP4Q96PP9 640 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 USP28Q96RU2 1077 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
MSRB3-206ENST00000535664 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 PSTPIP2Q9H939 334 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 TMEM260Q9NX78 707 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 FRMPD3Q5JV73 1810 aa16.54■□□□□ 0.24
MSRB3-206ENST00000535664 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 KPNA6O60684 536 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 CCSAPQ6IQ19 270 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-206ENST00000535664 PIK3AP1Q6ZUJ8 805 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 STARD7Q9NQZ5 370 aa16.53■□□□□ 0.24
MSRB3-206ENST00000535664 A0A1W2PQ45 241 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 A0A1W2PQY0 241 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 WNT7AO00755 349 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 EDIL3O43854 480 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 STAM2O75886 525 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 SMPD1P17405 629 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 MCM4P33991 863 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 BMP8BP34820 402 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 CPT1AP50416 773 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 RTP1P59025 263 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 KRT85P78386 507 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 RILPL1Q5EBL4 403 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 USP17L6PQ6QN14 398 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 EEPD1Q7L9B9 569 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 FBXO16Q8IX29 292 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 TBC1D5Q92609 795 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 ZNF396Q96N95 335 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-206ENST00000535664 TAAR1Q96RJ0 339 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
MSRB3-206ENST00000535664 TCHHQ07283 1943 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 ASGR1P07306 291 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 TRAPPC10P48553 1259 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-206ENST00000535664 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 NBR1Q14596 966 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 PURBQ96QR8 312 aaKnown RBP16.51■□□□□ 0.23
MSRB3-206ENST00000535664 LBHD1Q9BQE6 289 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-206ENST00000535664 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 TFIP11Q9UBB9 837 aaKnown RBP16.51■□□□□ 0.23
MSRB3-206ENST00000535664 ATP11BQ9Y2G3 1177 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
MSRB3-206ENST00000535664 CCDC194A0A1B0GVG4 234 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 DCDC2CA8MYV0 355 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 NR3C2P08235 984 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 TGFB3P10600 412 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 PTPAQ15257 358 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 ANKRD33Q7Z3H0 272 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 LEO1Q8WVC0 666 aaPredicted RBP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 CRYGNQ8WXF5 182 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 GDPD2Q9HCC8 539 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 PDGFCQ9NRA1 345 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 RCOR1Q9UKL0 485 aa16.5■□□□□ 0.23
MSRB3-206ENST00000535664 COLQQ9Y215 455 aaPredicted RBP16.5■□□□□ 0.23
MSRB3-206ENST00000535664 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
MSRB3-206ENST00000535664 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
MSRB3-206ENST00000535664 FIBPO43427 364 aa16.49■□□□□ 0.23
MSRB3-206ENST00000535664 YEATS4O95619 227 aa16.49■□□□□ 0.23
MSRB3-206ENST00000535664 INF2Q27J81 1249 aa16.49■□□□□ 0.23
MSRB3-206ENST00000535664 MCTP2Q6DN12 878 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms