RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SOS1Q07889 1333 aaPredicted RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 DLG5Q8TDM6 1919 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 SMAD7O15105 426 aaKnown RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 SLU7O95391 586 aaKnown RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 HMOX1P09601 288 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 CHMLP26374 656 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 HSPA4P34932 840 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 ETFBP38117 255 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 TOM1L2Q6ZVM7 507 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 SLFN12Q8IYM2 578 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 SPC24Q8NBT2 197 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 EZH1Q92800 747 aaPredicted RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 ATG4CQ96DT6 458 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 DHRS1Q96LJ7 313 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 MIPEPQ99797 713 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 FUCA2Q9BTY2 467 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 NAT10Q9H0A0 1025 aaKnown RBP7.61□□□□□ -1.19
USP28-202ENST00000535607 FBRSQ9HAH7 460 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 KCND1Q9NSA2 647 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 STAP2Q9UGK3 403 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 PYCARDQ9ULZ3 195 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 MRC1P22897 1456 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 PCDH11XQ9BZA7 1347 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 PCDH11YQ9BZA8 1340 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CHURC1-FNTBB4DL54 471 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 FIBPO43427 364 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 NME1P15531 152 aaKnown RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 CYP7A1P22680 504 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 PTGS1P23219 599 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CAP2P40123 477 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 ETV3P41162 512 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 ZNF75DP51815 510 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 EVA1CP58658 441 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 HSP90AB4PQ58FF6 505 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CDCP2Q5VXM1 449 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 ZSCAN25Q6NSZ9 544 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 ARHGAP27Q6ZUM4 889 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CCDC186Q7Z3E2 898 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 UNC5CLQ8IV45 518 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CNTROBQ8N137 903 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 ARMC10Q8N2F6 343 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 C19orf47Q8N9M1 422 aaKnown RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 TDRD7Q8NHU6 1098 aaKnown RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 CYB5D2Q8WUJ1 264 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 RILPL2Q969X0 211 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 C16orf45Q96MC5 204 aaPredicted RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 CLIP2Q9UDT6 1046 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 TPX2Q9ULW0 747 aaKnown RBP7.6□□□□□ -1.19
USP28-202ENST00000535607 HDAC5Q9UQL6 1122 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 CNPY2Q9Y2B0 182 aa7.6□□□□□ -1.19
USP28-202ENST00000535607 TUBGCP6Q96RT7 1819 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 SPATA31A1Q5TZJ5 1347 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 UPK3BL1B0FP48 263 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 UPK3BL2E5RIL1 263 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 HIP1O00291 1037 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 IL2RBP14784 551 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 SYT1P21579 422 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 PSMA5P28066 241 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 CCNFP41002 786 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 TUBB4BP68371 445 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 RBM6P78332 1123 aaKnown RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 VPS72Q15906 364 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 FXNQ16595 210 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 NKG7Q16617 165 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 PLEKHO1Q53GL0 409 aaPredicted RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 MEX3CQ5U5Q3 659 aaKnown RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 VPS53Q5VIR6 699 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 GIMAP6Q6P9H5 292 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 SARM1Q6SZW1 724 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 PLA2G4DQ86XP0 818 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 C16orf71Q8IYS4 520 aaPredicted RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 TAB3Q8N5C8 712 aaPredicted RBP7.59□□□□□ -1.19
USP28-202ENST00000535607 MRFAP1L1Q96HT8 127 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 GPATCH3Q96I76 525 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 FAM83CQ9BQN1 747 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 TM6SF1Q9BZW5 370 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 CNNM2Q9H8M5 875 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 ATRNO75882 1429 aa7.59□□□□□ -1.19
USP28-202ENST00000535607 CEMIPQ8WUJ3 1361 aa7.59□□□□□ -1.2
USP28-202ENST00000535607 SPATA31A5Q5VU36 1347 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 SPATA31A7Q8IWB4 1347 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 BECN2A8MW95 431 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 TULP2O00295 520 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 GSC2O15499 205 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 IGSF3O75054 1194 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 CLEC3AO75596 197 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 NTF4P34130 210 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 KCNJ6P48051 423 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 IRX3P78415 501 aaPredicted RBP7.58□□□□□ -1.2
USP28-202ENST00000535607 CYP27A1Q02318 531 aa7.58□□□□□ -1.2
USP28-202ENST00000535607 SLBPQ14493 270 aaKnown RBP eCLIP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms